==2496929== Memcheck, a memory error detector ==2496929== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2496929== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2496929== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestImmersedBoundaryPalisadeMeshGenerator -malloc_debug -malloc_dump -memory_info ==2496929== Parent PID: 2496142 ==2496929== ==2496929== ==2496929== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2496929== Open file descriptor 12: ==2496929== at 0x80E522D: pipe (pipe.c:29) ==2496929== by 0x100A207D: ??? ==2496929== by 0xB9E14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2496929== by 0x79F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496929== by 0x798AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496929== by 0x665FD38: PetscInitialize (pinit.c:924) ==2496929== by 0x653623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2496929== by 0x653628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2496929== by 0x113C33: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2496929== by 0x10F4E5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2496929== by 0x111CB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2496929== by 0x111B50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2496929== by 0x1121E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2496929== by 0x10D815: main (TestImmersedBoundaryPalisadeMeshGenerator.cpp:19) ==2496929== ==2496929== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2496929== at 0x80E9BCC: __open_nocancel (open64_nocancel.c:39) ==2496929== by 0x806DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2496929== by 0x78E9822: ??? ==2496929== by 0x78E996F: ??? ==2496929== by 0xBA866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496929== by 0xBA86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496929== by 0xBA3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496929== by 0xB9E12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2496929== by 0x79F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496929== by 0x798AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496929== by 0x665FD38: PetscInitialize (pinit.c:924) ==2496929== by 0x653623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2496929== by 0x653628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2496929== by 0x113C33: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2496929== by 0x10F4E5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2496929== by 0x111CB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2496929== by 0x111B50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2496929== by 0x1121E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2496929== by 0x10D815: main (TestImmersedBoundaryPalisadeMeshGenerator.cpp:19) ==2496929== ==2496929== Open file descriptor 115: ==2496929== ==2496929== ==2496929== Open file descriptor 111: ==2496929== ==2496929== ==2496929== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestImmersedBoundaryPalisadeMeshGenerator_valgrind.txt ==2496929== ==2496929== ==2496929== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2496929== ==2496929== ==2496929== ==2496929== HEAP SUMMARY: ==2496929== in use at exit: 723,895 bytes in 9,546 blocks ==2496929== total heap usage: 57,772 allocs, 48,226 frees, 1,369,056,592 bytes allocated ==2496929== ==2496929== 20,712 (128 direct, 20,584 indirect) bytes in 1 blocks are definitely lost in loss record 63 of 67 ==2496929== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==2496929== by 0x5BB8ABC: ImmersedBoundaryPalisadeMeshGenerator::ImmersedBoundaryPalisadeMeshGenerator(unsigned int, unsigned int, double, double, double, bool, bool, bool, unsigned int, double) (ImmersedBoundaryPalisadeMeshGenerator.cpp:222) ==2496929== by 0x1144A9: TestImmersedBoundaryPalisadeMeshGenerator::TestCellGenerationExceptions() (TestImmersedBoundaryPalisadeMeshGenerator.hpp:86) ==2496929== by 0x1146C2: TestDescription_TestImmersedBoundaryPalisadeMeshGenerator_TestCellGenerationExceptions::runTest() (TestImmersedBoundaryPalisadeMeshGenerator.cpp:43) ==2496929== by 0x10EAE0: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==2496929== by 0x111F5E: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==2496929== by 0x111E43: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==2496929== by 0x111CE9: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==2496929== by 0x111B50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2496929== by 0x1121E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2496929== by 0x10D815: main (TestImmersedBoundaryPalisadeMeshGenerator.cpp:19) ==2496929== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN37ImmersedBoundaryPalisadeMeshGeneratorC1Ejjdddbbbjd fun:_ZN41TestImmersedBoundaryPalisadeMeshGenerator28TestCellGenerationExceptionsEv fun:_ZN86TestDescription_TestImmersedBoundaryPalisadeMeshGenerator_TestCellGenerationExceptions7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==2496929== LEAK SUMMARY: ==2496929== definitely lost: 128 bytes in 1 blocks ==2496929== indirectly lost: 20,584 bytes in 167 blocks ==2496929== possibly lost: 0 bytes in 0 blocks ==2496929== still reachable: 2,576 bytes in 3 blocks ==2496929== suppressed: 700,607 bytes in 9,375 blocks ==2496929== Reachable blocks (those to which a pointer was found) are not shown. ==2496929== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2496929== ==2496929== For lists of detected and suppressed errors, rerun with: -s ==2496929== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)