==2498325== Memcheck, a memory error detector ==2498325== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2498325== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2498325== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==2498325== Parent PID: 2496142 ==2498325== ==2498325== ==2498325== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2498325== Open file descriptor 12: ==2498325== at 0x10E9022D: pipe (pipe.c:29) ==2498325== by 0x1976707D: ??? ==2498325== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2498325== by 0x106B3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498325== by 0x1064CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498325== by 0xF343D38: PetscInitialize (pinit.c:924) ==2498325== by 0xF1B823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2498325== by 0xF1B828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2498325== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2498325== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2498325== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2498325== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2498325== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2498325== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2498325== ==2498325== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2498325== at 0x10E94BCC: __open_nocancel (open64_nocancel.c:39) ==2498325== by 0x10E18C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2498325== by 0xF1ED822: ??? ==2498325== by 0xF1ED96F: ??? ==2498325== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498325== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498325== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498325== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2498325== by 0x106B3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498325== by 0x1064CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498325== by 0xF343D38: PetscInitialize (pinit.c:924) ==2498325== by 0xF1B823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2498325== by 0xF1B828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2498325== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2498325== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2498325== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2498325== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2498325== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2498325== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2498325== ==2498325== Open file descriptor 115: ==2498325== ==2498325== ==2498325== Open file descriptor 111: ==2498325== ==2498325== ==2498325== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==2498325== ==2498325== ==2498325== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2498325== ==2498325== ==2498325== ==2498325== HEAP SUMMARY: ==2498325== in use at exit: 700,759 bytes in 9,378 blocks ==2498325== total heap usage: 857,149 allocs, 847,771 frees, 1,519,181,327 bytes allocated ==2498325== ==2498325== LEAK SUMMARY: ==2498325== definitely lost: 0 bytes in 0 blocks ==2498325== indirectly lost: 0 bytes in 0 blocks ==2498325== possibly lost: 0 bytes in 0 blocks ==2498325== still reachable: 56 bytes in 3 blocks ==2498325== suppressed: 700,703 bytes in 9,375 blocks ==2498325== Reachable blocks (those to which a pointer was found) are not shown. ==2498325== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2498325== ==2498325== For lists of detected and suppressed errors, rerun with: -s ==2498325== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)