==2498540== Memcheck, a memory error detector ==2498540== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2498540== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2498540== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2498540== Parent PID: 2496142 ==2498540== ==2498540== ==2498540== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2498540== Open file descriptor 12: ==2498540== at 0xFD7822D: pipe (pipe.c:29) ==2498540== by 0x1976607D: ??? ==2498540== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2498540== by 0x11637418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498540== by 0x115D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498540== by 0x102C7D38: PetscInitialize (pinit.c:924) ==2498540== by 0xF55523F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2498540== by 0xF55528D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2498540== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2498540== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2498540== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2498540== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2498540== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2498540== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2498540== ==2498540== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2498540== at 0xFD7CBCC: __open_nocancel (open64_nocancel.c:39) ==2498540== by 0xFD00C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2498540== by 0xF58A822: ??? ==2498540== by 0xF58A96F: ??? ==2498540== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498540== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498540== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2498540== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2498540== by 0x11637418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498540== by 0x115D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2498540== by 0x102C7D38: PetscInitialize (pinit.c:924) ==2498540== by 0xF55523F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2498540== by 0xF55528D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2498540== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2498540== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2498540== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2498540== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2498540== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2498540== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2498540== ==2498540== Open file descriptor 115: ==2498540== ==2498540== ==2498540== Open file descriptor 111: ==2498540== ==2498540== ==2498540== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==2498540== ==2498540== ==2498540== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2498540== ==2498540== ==2498540== ==2498540== HEAP SUMMARY: ==2498540== in use at exit: 700,688 bytes in 9,374 blocks ==2498540== total heap usage: 7,488,960 allocs, 7,479,586 frees, 2,658,302,724 bytes allocated ==2498540== ==2498540== LEAK SUMMARY: ==2498540== definitely lost: 0 bytes in 0 blocks ==2498540== indirectly lost: 0 bytes in 0 blocks ==2498540== possibly lost: 0 bytes in 0 blocks ==2498540== still reachable: 56 bytes in 3 blocks ==2498540== suppressed: 700,632 bytes in 9,371 blocks ==2498540== Reachable blocks (those to which a pointer was found) are not shown. ==2498540== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2498540== ==2498540== For lists of detected and suppressed errors, rerun with: -s ==2498540== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)