==2511841== Memcheck, a memory error detector ==2511841== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2511841== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2511841== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2511841== Parent PID: 2496142 ==2511841== ==2511841== ==2511841== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2511841== Open file descriptor 12: ==2511841== at 0x10E4E22D: pipe (pipe.c:29) ==2511841== by 0x1976707D: ??? ==2511841== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2511841== by 0x10671418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511841== by 0x1060AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511841== by 0xF2E1D38: PetscInitialize (pinit.c:924) ==2511841== by 0xF1B823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2511841== by 0xF1B828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2511841== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2511841== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2511841== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2511841== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2511841== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2511841== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2511841== ==2511841== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2511841== at 0x10E52BCC: __open_nocancel (open64_nocancel.c:39) ==2511841== by 0x10DD6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2511841== by 0x1056B822: ??? ==2511841== by 0x1056B96F: ??? ==2511841== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511841== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511841== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511841== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2511841== by 0x10671418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511841== by 0x1060AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511841== by 0xF2E1D38: PetscInitialize (pinit.c:924) ==2511841== by 0xF1B823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2511841== by 0xF1B828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2511841== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2511841== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2511841== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2511841== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2511841== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2511841== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2511841== ==2511841== Open file descriptor 115: ==2511841== ==2511841== ==2511841== Open file descriptor 111: ==2511841== ==2511841== ==2511841== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==2511841== ==2511841== ==2511841== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2511841== ==2511841== ==2511841== ==2511841== HEAP SUMMARY: ==2511841== in use at exit: 700,759 bytes in 9,378 blocks ==2511841== total heap usage: 1,401,719 allocs, 1,392,341 frees, 1,413,637,721 bytes allocated ==2511841== ==2511841== LEAK SUMMARY: ==2511841== definitely lost: 0 bytes in 0 blocks ==2511841== indirectly lost: 0 bytes in 0 blocks ==2511841== possibly lost: 0 bytes in 0 blocks ==2511841== still reachable: 56 bytes in 3 blocks ==2511841== suppressed: 700,703 bytes in 9,375 blocks ==2511841== Reachable blocks (those to which a pointer was found) are not shown. ==2511841== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2511841== ==2511841== For lists of detected and suppressed errors, rerun with: -s ==2511841== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)