==2537616== Memcheck, a memory error detector ==2537616== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2537616== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2537616== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==2537616== Parent PID: 2536439 ==2537616== ==2537616== ==2537616== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2537616== Open file descriptor 12: ==2537616== at 0xE44922D: pipe (pipe.c:29) ==2537616== by 0x18A0607D: ??? ==2537616== by 0x12F564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2537616== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537616== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537616== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2537616== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2537616== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2537616== by 0x12CFB9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2537616== by 0x127F59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2537616== by 0x12A8E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2537616== by 0x12A782: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2537616== by 0x12AE19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2537616== by 0x126245: main (TestCellMutationStates.cpp:19) ==2537616== ==2537616== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2537616== at 0xE44DBCC: __open_nocancel (open64_nocancel.c:39) ==2537616== by 0xE3D1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2537616== by 0xCBD2822: ??? ==2537616== by 0xCBD296F: ??? ==2537616== by 0x12FFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537616== by 0x12FFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537616== by 0x12FB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537616== by 0x12F562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2537616== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537616== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537616== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2537616== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2537616== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2537616== by 0x12CFB9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2537616== by 0x127F59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2537616== by 0x12A8E2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2537616== by 0x12A782: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2537616== by 0x12AE19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2537616== by 0x126245: main (TestCellMutationStates.cpp:19) ==2537616== ==2537616== Open file descriptor 116: ==2537616== ==2537616== ==2537616== Open file descriptor 112: ==2537616== ==2537616== ==2537616== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==2537616== ==2537616== ==2537616== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2537616== ==2537616== ==2537616== ==2537616== HEAP SUMMARY: ==2537616== in use at exit: 700,759 bytes in 9,378 blocks ==2537616== total heap usage: 54,916 allocs, 45,538 frees, 1,353,959,814 bytes allocated ==2537616== ==2537616== LEAK SUMMARY: ==2537616== definitely lost: 0 bytes in 0 blocks ==2537616== indirectly lost: 0 bytes in 0 blocks ==2537616== possibly lost: 0 bytes in 0 blocks ==2537616== still reachable: 56 bytes in 3 blocks ==2537616== suppressed: 700,703 bytes in 9,375 blocks ==2537616== Reachable blocks (those to which a pointer was found) are not shown. ==2537616== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2537616== ==2537616== For lists of detected and suppressed errors, rerun with: -s ==2537616== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)