==2552216== Memcheck, a memory error detector ==2552216== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2552216== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2552216== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2552216== Parent PID: 2536439 ==2552216== ==2552216== ==2552216== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2552216== Open file descriptor 12: ==2552216== at 0x1190822D: pipe (pipe.c:29) ==2552216== by 0x1A6C707D: ??? ==2552216== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2552216== by 0x11212418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2552216== by 0x111ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2552216== by 0xFEA2D38: PetscInitialize (pinit.c:924) ==2552216== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2552216== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2552216== by 0x2247E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2552216== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2552216== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2552216== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2552216== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2552216== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==2552216== ==2552216== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2552216== at 0x1190CBCC: __open_nocancel (open64_nocancel.c:39) ==2552216== by 0x11890C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2552216== by 0xFD4C822: ??? ==2552216== by 0xFD4C96F: ??? ==2552216== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2552216== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2552216== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2552216== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2552216== by 0x11212418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2552216== by 0x111ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2552216== by 0xFEA2D38: PetscInitialize (pinit.c:924) ==2552216== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2552216== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2552216== by 0x2247E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2552216== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2552216== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2552216== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2552216== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2552216== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==2552216== ==2552216== Open file descriptor 116: ==2552216== ==2552216== ==2552216== Open file descriptor 112: ==2552216== ==2552216== ==2552216== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==2552216== ==2552216== ==2552216== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2552216== ==2552216== ==2552216== ==2552216== HEAP SUMMARY: ==2552216== in use at exit: 700,704 bytes in 9,374 blocks ==2552216== total heap usage: 3,719,992 allocs, 3,710,618 frees, 1,636,714,888 bytes allocated ==2552216== ==2552216== LEAK SUMMARY: ==2552216== definitely lost: 0 bytes in 0 blocks ==2552216== indirectly lost: 0 bytes in 0 blocks ==2552216== possibly lost: 0 bytes in 0 blocks ==2552216== still reachable: 56 bytes in 3 blocks ==2552216== suppressed: 700,648 bytes in 9,371 blocks ==2552216== Reachable blocks (those to which a pointer was found) are not shown. ==2552216== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2552216== ==2552216== For lists of detected and suppressed errors, rerun with: -s ==2552216== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)