==2538698== Memcheck, a memory error detector ==2538698== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2538698== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2538698== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2538698== Parent PID: 2536439 ==2538698== ==2538698== ==2538698== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2538698== Open file descriptor 12: ==2538698== at 0x1012F22D: pipe (pipe.c:29) ==2538698== by 0x18A0507D: ??? ==2538698== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2538698== by 0xF952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538698== by 0xF8EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538698== by 0xE5E2D38: PetscInitialize (pinit.c:924) ==2538698== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2538698== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2538698== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2538698== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2538698== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2538698== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2538698== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2538698== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==2538698== ==2538698== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2538698== at 0x10133BCC: __open_nocancel (open64_nocancel.c:39) ==2538698== by 0x100B7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2538698== by 0xE48C822: ??? ==2538698== by 0xE48C96F: ??? ==2538698== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538698== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538698== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538698== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2538698== by 0xF952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538698== by 0xF8EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538698== by 0xE5E2D38: PetscInitialize (pinit.c:924) ==2538698== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2538698== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2538698== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2538698== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2538698== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2538698== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2538698== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2538698== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==2538698== ==2538698== Open file descriptor 116: ==2538698== ==2538698== ==2538698== Open file descriptor 112: ==2538698== ==2538698== ==2538698== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==2538698== ==2538698== ==2538698== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2538698== ==2538698== ==2538698== ==2538698== HEAP SUMMARY: ==2538698== in use at exit: 700,688 bytes in 9,374 blocks ==2538698== total heap usage: 9,749,306 allocs, 9,739,932 frees, 2,617,606,182 bytes allocated ==2538698== ==2538698== LEAK SUMMARY: ==2538698== definitely lost: 0 bytes in 0 blocks ==2538698== indirectly lost: 0 bytes in 0 blocks ==2538698== possibly lost: 0 bytes in 0 blocks ==2538698== still reachable: 56 bytes in 3 blocks ==2538698== suppressed: 700,632 bytes in 9,371 blocks ==2538698== Reachable blocks (those to which a pointer was found) are not shown. ==2538698== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2538698== ==2538698== For lists of detected and suppressed errors, rerun with: -s ==2538698== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)