==2537723== Memcheck, a memory error detector ==2537723== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2537723== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2537723== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2537723== Parent PID: 2536439 ==2537723== ==2537723== ==2537723== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2537723== Open file descriptor 12: ==2537723== at 0x103E522D: pipe (pipe.c:29) ==2537723== by 0x18A0507D: ??? ==2537723== by 0x13F6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2537723== by 0xFCEF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537723== by 0xFC88D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537723== by 0xE97FD38: PetscInitialize (pinit.c:924) ==2537723== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2537723== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2537723== by 0x132D57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2537723== by 0x12D6F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2537723== by 0x130394: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2537723== by 0x130234: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2537723== by 0x1308CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2537723== by 0x12BA25: main (TestParabolicBoxDomainPdeModifier.cpp:19) ==2537723== ==2537723== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2537723== at 0x103E9BCC: __open_nocancel (open64_nocancel.c:39) ==2537723== by 0x1036DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2537723== by 0xE829822: ??? ==2537723== by 0xE82996F: ??? ==2537723== by 0x140136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537723== by 0x14013938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537723== by 0x13FC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2537723== by 0x13F6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2537723== by 0xFCEF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537723== by 0xFC88D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2537723== by 0xE97FD38: PetscInitialize (pinit.c:924) ==2537723== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2537723== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2537723== by 0x132D57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2537723== by 0x12D6F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2537723== by 0x130394: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2537723== by 0x130234: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2537723== by 0x1308CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2537723== by 0x12BA25: main (TestParabolicBoxDomainPdeModifier.cpp:19) ==2537723== ==2537723== Open file descriptor 116: ==2537723== ==2537723== ==2537723== Open file descriptor 112: ==2537723== ==2537723== ==2537723== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParabolicBoxDomainPdeModifier_valgrind.txt ==2537723== ==2537723== ==2537723== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2537723== ==2537723== ==2537723== ==2537723== HEAP SUMMARY: ==2537723== in use at exit: 700,759 bytes in 9,378 blocks ==2537723== total heap usage: 2,608,876 allocs, 2,599,498 frees, 1,633,590,157 bytes allocated ==2537723== ==2537723== LEAK SUMMARY: ==2537723== definitely lost: 0 bytes in 0 blocks ==2537723== indirectly lost: 0 bytes in 0 blocks ==2537723== possibly lost: 0 bytes in 0 blocks ==2537723== still reachable: 56 bytes in 3 blocks ==2537723== suppressed: 700,703 bytes in 9,375 blocks ==2537723== Reachable blocks (those to which a pointer was found) are not shown. ==2537723== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2537723== ==2537723== For lists of detected and suppressed errors, rerun with: -s ==2537723== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)