==2551916== Memcheck, a memory error detector ==2551916== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2551916== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2551916== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2551916== Parent PID: 2536439 ==2551916== ==2551916== ==2551916== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2551916== Open file descriptor 12: ==2551916== at 0xD29722D: pipe (pipe.c:29) ==2551916== by 0x18A0607D: ??? ==2551916== by 0x140164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2551916== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2551916== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2551916== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2551916== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2551916== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2551916== by 0x12388C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2551916== by 0x11EDA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2551916== by 0x1213C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2551916== by 0x121266: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2551916== by 0x1218FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2551916== by 0x11D0D5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==2551916== ==2551916== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2551916== at 0xD29BBCC: __open_nocancel (open64_nocancel.c:39) ==2551916== by 0xD21FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2551916== by 0xCBD2822: ??? ==2551916== by 0xCBD296F: ??? ==2551916== by 0x140BB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2551916== by 0x140BB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2551916== by 0x14071922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2551916== by 0x140162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2551916== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2551916== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2551916== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2551916== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2551916== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2551916== by 0x12388C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2551916== by 0x11EDA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2551916== by 0x1213C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2551916== by 0x121266: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2551916== by 0x1218FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2551916== by 0x11D0D5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==2551916== ==2551916== Open file descriptor 116: ==2551916== ==2551916== ==2551916== Open file descriptor 112: ==2551916== ==2551916== ==2551916== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==2551916== ==2551916== ==2551916== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2551916== ==2551916== ==2551916== ==2551916== HEAP SUMMARY: ==2551916== in use at exit: 700,688 bytes in 9,374 blocks ==2551916== total heap usage: 40,690,933 allocs, 40,681,559 frees, 3,845,983,557 bytes allocated ==2551916== ==2551916== LEAK SUMMARY: ==2551916== definitely lost: 0 bytes in 0 blocks ==2551916== indirectly lost: 0 bytes in 0 blocks ==2551916== possibly lost: 0 bytes in 0 blocks ==2551916== still reachable: 56 bytes in 3 blocks ==2551916== suppressed: 700,632 bytes in 9,371 blocks ==2551916== Reachable blocks (those to which a pointer was found) are not shown. ==2551916== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2551916== ==2551916== For lists of detected and suppressed errors, rerun with: -s ==2551916== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)