==2629498== Memcheck, a memory error detector ==2629498== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2629498== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2629498== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2629498== Parent PID: 2613719 ==2629498== ==2629498== ==2629498== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2629498== Open file descriptor 12: ==2629498== at 0x1053922D: pipe (pipe.c:29) ==2629498== by 0x1A6C807D: ??? ==2629498== by 0x158C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2629498== by 0x12195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629498== by 0x1212ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629498== by 0x10E25D38: PetscInitialize (pinit.c:924) ==2629498== by 0xFD170B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2629498== by 0xFD17101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2629498== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2629498== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2629498== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2629498== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2629498== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2629498== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==2629498== ==2629498== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2629498== at 0x1053DBCC: __open_nocancel (open64_nocancel.c:39) ==2629498== by 0x104C1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2629498== by 0xFD4B822: ??? ==2629498== by 0xFD4B96F: ??? ==2629498== by 0x1596D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629498== by 0x1596D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629498== by 0x15923922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629498== by 0x158C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2629498== by 0x12195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629498== by 0x1212ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629498== by 0x10E25D38: PetscInitialize (pinit.c:924) ==2629498== by 0xFD170B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2629498== by 0xFD17101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2629498== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2629498== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2629498== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2629498== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2629498== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2629498== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==2629498== ==2629498== Open file descriptor 116: ==2629498== ==2629498== ==2629498== Open file descriptor 112: ==2629498== ==2629498== ==2629498== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==2629498== ==2629498== ==2629498== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2629498== ==2629498== ==2629498== ==2629498== HEAP SUMMARY: ==2629498== in use at exit: 700,704 bytes in 9,374 blocks ==2629498== total heap usage: 6,309,651 allocs, 6,300,277 frees, 2,072,723,830 bytes allocated ==2629498== ==2629498== LEAK SUMMARY: ==2629498== definitely lost: 0 bytes in 0 blocks ==2629498== indirectly lost: 0 bytes in 0 blocks ==2629498== possibly lost: 0 bytes in 0 blocks ==2629498== still reachable: 56 bytes in 3 blocks ==2629498== suppressed: 700,648 bytes in 9,371 blocks ==2629498== Reachable blocks (those to which a pointer was found) are not shown. ==2629498== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2629498== ==2629498== For lists of detected and suppressed errors, rerun with: -s ==2629498== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)