==2629297== Memcheck, a memory error detector ==2629297== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2629297== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2629297== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==2629297== Parent PID: 2613719 ==2629297== ==2629297== ==2629297== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2629297== Open file descriptor 12: ==2629297== at 0x1029322D: pipe (pipe.c:29) ==2629297== by 0x1A6C807D: ??? ==2629297== by 0x148684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2629297== by 0xFB9D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629297== by 0xFB36D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629297== by 0xE82DD38: PetscInitialize (pinit.c:924) ==2629297== by 0xE6A30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2629297== by 0xE6A3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2629297== by 0x1926A1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2629297== by 0x18A643: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2629297== by 0x18DC40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2629297== by 0x18DAE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2629297== by 0x18E177: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2629297== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2629297== ==2629297== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2629297== at 0x10297BCC: __open_nocancel (open64_nocancel.c:39) ==2629297== by 0x1021BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2629297== by 0xE6D7822: ??? ==2629297== by 0xE6D796F: ??? ==2629297== by 0x1490D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629297== by 0x1490D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629297== by 0x148C3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2629297== by 0x148682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2629297== by 0xFB9D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629297== by 0xFB36D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2629297== by 0xE82DD38: PetscInitialize (pinit.c:924) ==2629297== by 0xE6A30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2629297== by 0xE6A3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2629297== by 0x1926A1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2629297== by 0x18A643: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2629297== by 0x18DC40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2629297== by 0x18DAE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2629297== by 0x18E177: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2629297== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2629297== ==2629297== Open file descriptor 116: ==2629297== ==2629297== ==2629297== Open file descriptor 112: ==2629297== ==2629297== ==2629297== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==2629297== ==2629297== ==2629297== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2629297== ==2629297== ==2629297== ==2629297== HEAP SUMMARY: ==2629297== in use at exit: 700,839 bytes in 9,379 blocks ==2629297== total heap usage: 863,768 allocs, 854,389 frees, 1,475,950,205 bytes allocated ==2629297== ==2629297== LEAK SUMMARY: ==2629297== definitely lost: 0 bytes in 0 blocks ==2629297== indirectly lost: 0 bytes in 0 blocks ==2629297== possibly lost: 0 bytes in 0 blocks ==2629297== still reachable: 120 bytes in 4 blocks ==2629297== suppressed: 700,719 bytes in 9,375 blocks ==2629297== Reachable blocks (those to which a pointer was found) are not shown. ==2629297== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2629297== ==2629297== For lists of detected and suppressed errors, rerun with: -s ==2629297== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)