==2614913== Memcheck, a memory error detector ==2614913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2614913== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2614913== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==2614913== Parent PID: 2613719 ==2614913== ==2614913== ==2614913== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2614913== Open file descriptor 12: ==2614913== at 0xE68E22D: pipe (pipe.c:29) ==2614913== by 0x18A0407D: ??? ==2614913== by 0x12FA64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2614913== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2614913== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2614913== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==2614913== by 0xCDE30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2614913== by 0xCDE3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2614913== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2614913== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2614913== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2614913== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2614913== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2614913== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2614913== ==2614913== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2614913== at 0xE692BCC: __open_nocancel (open64_nocancel.c:39) ==2614913== by 0xE616C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2614913== by 0xCE17822: ??? ==2614913== by 0xCE1796F: ??? ==2614913== by 0x1304B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2614913== by 0x1304B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2614913== by 0x13001922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2614913== by 0x12FA62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2614913== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2614913== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2614913== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==2614913== by 0xCDE30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2614913== by 0xCDE3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2614913== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2614913== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2614913== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2614913== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2614913== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2614913== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==2614913== ==2614913== Open file descriptor 116: ==2614913== ==2614913== ==2614913== Open file descriptor 112: ==2614913== ==2614913== ==2614913== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==2614913== ==2614913== ==2614913== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2614913== ==2614913== ==2614913== ==2614913== HEAP SUMMARY: ==2614913== in use at exit: 700,704 bytes in 9,375 blocks ==2614913== total heap usage: 4,181,057 allocs, 4,171,682 frees, 1,785,111,601 bytes allocated ==2614913== ==2614913== LEAK SUMMARY: ==2614913== definitely lost: 0 bytes in 0 blocks ==2614913== indirectly lost: 0 bytes in 0 blocks ==2614913== possibly lost: 0 bytes in 0 blocks ==2614913== still reachable: 72 bytes in 4 blocks ==2614913== suppressed: 700,632 bytes in 9,371 blocks ==2614913== Reachable blocks (those to which a pointer was found) are not shown. ==2614913== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2614913== ==2614913== For lists of detected and suppressed errors, rerun with: -s ==2614913== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)