==2615667== Memcheck, a memory error detector ==2615667== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2615667== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2615667== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==2615667== Parent PID: 2613719 ==2615667== ==2615667== ==2615667== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2615667== Open file descriptor 12: ==2615667== at 0xEC7922D: pipe (pipe.c:29) ==2615667== by 0x18A0507D: ??? ==2615667== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2615667== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2615667== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2615667== by 0xF565D38: PetscInitialize (pinit.c:924) ==2615667== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2615667== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2615667== by 0x311546: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2615667== by 0x307B51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2615667== by 0x30BF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2615667== by 0x30BDF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2615667== by 0x30C48F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2615667== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==2615667== ==2615667== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2615667== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==2615667== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2615667== by 0xE48B822: ??? ==2615667== by 0xE48B96F: ??? ==2615667== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2615667== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2615667== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2615667== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2615667== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2615667== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2615667== by 0xF565D38: PetscInitialize (pinit.c:924) ==2615667== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2615667== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2615667== by 0x311546: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2615667== by 0x307B51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2615667== by 0x30BF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2615667== by 0x30BDF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2615667== by 0x30C48F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2615667== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==2615667== ==2615667== Open file descriptor 116: ==2615667== ==2615667== ==2615667== Open file descriptor 112: ==2615667== ==2615667== ==2615667== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==2615667== ==2615667== ==2615667== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2615667== ==2615667== ==2615667== ==2615667== HEAP SUMMARY: ==2615667== in use at exit: 700,688 bytes in 9,374 blocks ==2615667== total heap usage: 12,851,210 allocs, 12,841,836 frees, 3,876,760,623 bytes allocated ==2615667== ==2615667== LEAK SUMMARY: ==2615667== definitely lost: 0 bytes in 0 blocks ==2615667== indirectly lost: 0 bytes in 0 blocks ==2615667== possibly lost: 0 bytes in 0 blocks ==2615667== still reachable: 56 bytes in 3 blocks ==2615667== suppressed: 700,632 bytes in 9,371 blocks ==2615667== Reachable blocks (those to which a pointer was found) are not shown. ==2615667== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2615667== ==2615667== For lists of detected and suppressed errors, rerun with: -s ==2615667== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)