==2693197== Memcheck, a memory error detector ==2693197== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2693197== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2693197== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==2693197== Parent PID: 2691191 ==2693197== ==2693197== ==2693197== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2693197== Open file descriptor 12: ==2693197== at 0x1012E22D: pipe (pipe.c:29) ==2693197== by 0x18A0507D: ??? ==2693197== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2693197== by 0xF951418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2693197== by 0xF8EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2693197== by 0xE5E1D38: PetscInitialize (pinit.c:924) ==2693197== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2693197== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2693197== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2693197== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2693197== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2693197== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2693197== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2693197== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2693197== ==2693197== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2693197== at 0x10132BCC: __open_nocancel (open64_nocancel.c:39) ==2693197== by 0x100B6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2693197== by 0xE48B822: ??? ==2693197== by 0xE48B96F: ??? ==2693197== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2693197== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2693197== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2693197== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2693197== by 0xF951418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2693197== by 0xF8EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2693197== by 0xE5E1D38: PetscInitialize (pinit.c:924) ==2693197== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2693197== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2693197== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2693197== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2693197== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2693197== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2693197== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2693197== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2693197== ==2693197== Open file descriptor 116: ==2693197== ==2693197== ==2693197== Open file descriptor 112: ==2693197== ==2693197== ==2693197== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==2693197== ==2693197== ==2693197== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2693197== ==2693197== ==2693197== ==2693197== HEAP SUMMARY: ==2693197== in use at exit: 700,759 bytes in 9,378 blocks ==2693197== total heap usage: 856,557 allocs, 847,179 frees, 1,519,129,065 bytes allocated ==2693197== ==2693197== LEAK SUMMARY: ==2693197== definitely lost: 0 bytes in 0 blocks ==2693197== indirectly lost: 0 bytes in 0 blocks ==2693197== possibly lost: 0 bytes in 0 blocks ==2693197== still reachable: 56 bytes in 3 blocks ==2693197== suppressed: 700,703 bytes in 9,375 blocks ==2693197== Reachable blocks (those to which a pointer was found) are not shown. ==2693197== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2693197== ==2693197== For lists of detected and suppressed errors, rerun with: -s ==2693197== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)