==2707342== Memcheck, a memory error detector ==2707342== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2707342== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2707342== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2707342== Parent PID: 2691191 ==2707342== ==2707342== ==2707342== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2707342== Open file descriptor 12: ==2707342== at 0x118C522D: pipe (pipe.c:29) ==2707342== by 0x1A6C507D: ??? ==2707342== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2707342== by 0x111CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2707342== by 0x11168D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2707342== by 0xFE3FD38: PetscInitialize (pinit.c:924) ==2707342== by 0xFD170B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2707342== by 0xFD17101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2707342== by 0x11FDC3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2707342== by 0x11B633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2707342== by 0x11D8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2707342== by 0x11D7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2707342== by 0x11DDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2707342== by 0x119E35: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==2707342== ==2707342== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2707342== at 0x118C9BCC: __open_nocancel (open64_nocancel.c:39) ==2707342== by 0x1184DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2707342== by 0x110C9822: ??? ==2707342== by 0x110C996F: ??? ==2707342== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2707342== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2707342== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2707342== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2707342== by 0x111CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2707342== by 0x11168D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2707342== by 0xFE3FD38: PetscInitialize (pinit.c:924) ==2707342== by 0xFD170B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2707342== by 0xFD17101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2707342== by 0x11FDC3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2707342== by 0x11B633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2707342== by 0x11D8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2707342== by 0x11D7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2707342== by 0x11DDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2707342== by 0x119E35: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==2707342== ==2707342== Open file descriptor 116: ==2707342== ==2707342== ==2707342== Open file descriptor 112: ==2707342== ==2707342== ==2707342== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==2707342== ==2707342== ==2707342== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2707342== ==2707342== ==2707342== ==2707342== HEAP SUMMARY: ==2707342== in use at exit: 700,855 bytes in 9,379 blocks ==2707342== total heap usage: 1,620,556 allocs, 1,611,177 frees, 1,473,830,656 bytes allocated ==2707342== ==2707342== LEAK SUMMARY: ==2707342== definitely lost: 0 bytes in 0 blocks ==2707342== indirectly lost: 0 bytes in 0 blocks ==2707342== possibly lost: 0 bytes in 0 blocks ==2707342== still reachable: 136 bytes in 4 blocks ==2707342== suppressed: 700,719 bytes in 9,375 blocks ==2707342== Reachable blocks (those to which a pointer was found) are not shown. ==2707342== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2707342== ==2707342== For lists of detected and suppressed errors, rerun with: -s ==2707342== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)