==2706879== Memcheck, a memory error detector ==2706879== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2706879== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2706879== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2706879== Parent PID: 2691191 ==2706879== ==2706879== ==2706879== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2706879== Open file descriptor 12: ==2706879== at 0x11B4A22D: pipe (pipe.c:29) ==2706879== by 0x1A6C607D: ??? ==2706879== by 0x1587B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2706879== by 0x11456418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2706879== by 0x113EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2706879== by 0x100E4D38: PetscInitialize (pinit.c:924) ==2706879== by 0xFF5A0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2706879== by 0xFF5A101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2706879== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2706879== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2706879== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2706879== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2706879== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2706879== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2706879== ==2706879== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2706879== at 0x11B4EBCC: __open_nocancel (open64_nocancel.c:39) ==2706879== by 0x11AD2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2706879== by 0xFF8E822: ??? ==2706879== by 0xFF8E96F: ??? ==2706879== by 0x159206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2706879== by 0x15920938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2706879== by 0x158D6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2706879== by 0x1587B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2706879== by 0x11456418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2706879== by 0x113EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2706879== by 0x100E4D38: PetscInitialize (pinit.c:924) ==2706879== by 0xFF5A0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2706879== by 0xFF5A101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2706879== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2706879== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2706879== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2706879== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2706879== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2706879== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2706879== ==2706879== Open file descriptor 116: ==2706879== ==2706879== ==2706879== Open file descriptor 112: ==2706879== ==2706879== ==2706879== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==2706879== ==2706879== ==2706879== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2706879== ==2706879== ==2706879== ==2706879== HEAP SUMMARY: ==2706879== in use at exit: 700,743 bytes in 9,377 blocks ==2706879== total heap usage: 521,213 allocs, 511,836 frees, 1,562,159,910 bytes allocated ==2706879== ==2706879== LEAK SUMMARY: ==2706879== definitely lost: 0 bytes in 0 blocks ==2706879== indirectly lost: 0 bytes in 0 blocks ==2706879== possibly lost: 0 bytes in 0 blocks ==2706879== still reachable: 24 bytes in 2 blocks ==2706879== suppressed: 700,719 bytes in 9,375 blocks ==2706879== Reachable blocks (those to which a pointer was found) are not shown. ==2706879== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2706879== ==2706879== For lists of detected and suppressed errors, rerun with: -s ==2706879== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)