==2743195== Memcheck, a memory error detector ==2743195== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2743195== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2743195== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2743195== Parent PID: 2727455 ==2743195== ==2743195== ==2743195== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2743195== Open file descriptor 12: ==2743195== at 0x1053A22D: pipe (pipe.c:29) ==2743195== by 0x1A6C807D: ??? ==2743195== by 0x158C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2743195== by 0x12196418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743195== by 0x1212FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743195== by 0x10E26D38: PetscInitialize (pinit.c:924) ==2743195== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2743195== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2743195== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2743195== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2743195== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2743195== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2743195== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2743195== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==2743195== ==2743195== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2743195== at 0x1053EBCC: __open_nocancel (open64_nocancel.c:39) ==2743195== by 0x104C2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2743195== by 0xFD4C822: ??? ==2743195== by 0xFD4C96F: ??? ==2743195== by 0x1596D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743195== by 0x1596D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743195== by 0x15923922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743195== by 0x158C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2743195== by 0x12196418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743195== by 0x1212FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743195== by 0x10E26D38: PetscInitialize (pinit.c:924) ==2743195== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2743195== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2743195== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2743195== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2743195== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2743195== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2743195== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2743195== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==2743195== ==2743195== Open file descriptor 116: ==2743195== ==2743195== ==2743195== Open file descriptor 112: ==2743195== ==2743195== ==2743195== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==2743195== ==2743195== ==2743195== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2743195== ==2743195== ==2743195== ==2743195== HEAP SUMMARY: ==2743195== in use at exit: 700,704 bytes in 9,374 blocks ==2743195== total heap usage: 6,313,168 allocs, 6,303,794 frees, 2,072,995,129 bytes allocated ==2743195== ==2743195== LEAK SUMMARY: ==2743195== definitely lost: 0 bytes in 0 blocks ==2743195== indirectly lost: 0 bytes in 0 blocks ==2743195== possibly lost: 0 bytes in 0 blocks ==2743195== still reachable: 56 bytes in 3 blocks ==2743195== suppressed: 700,648 bytes in 9,371 blocks ==2743195== Reachable blocks (those to which a pointer was found) are not shown. ==2743195== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2743195== ==2743195== For lists of detected and suppressed errors, rerun with: -s ==2743195== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)