==2743857== Memcheck, a memory error detector ==2743857== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2743857== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2743857== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==2743857== Parent PID: 2727455 ==2743857== ==2743857== ==2743857== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2743857== Open file descriptor 12: ==2743857== at 0xA5E522D: pipe (pipe.c:29) ==2743857== by 0x13F8307D: ??? ==2743857== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2743857== by 0x9ED5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743857== by 0x9E6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743857== by 0xA96FD38: PetscInitialize (pinit.c:924) ==2743857== by 0x9D9B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2743857== by 0x9D9B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2743857== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2743857== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2743857== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2743857== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2743857== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2743857== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2743857== ==2743857== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2743857== at 0xA5E9BCC: __open_nocancel (open64_nocancel.c:39) ==2743857== by 0xA56DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2743857== by 0x9DCF822: ??? ==2743857== by 0x9DCF96F: ??? ==2743857== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743857== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743857== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2743857== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2743857== by 0x9ED5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743857== by 0x9E6ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2743857== by 0xA96FD38: PetscInitialize (pinit.c:924) ==2743857== by 0x9D9B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2743857== by 0x9D9B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2743857== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2743857== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2743857== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2743857== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2743857== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2743857== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2743857== ==2743857== Open file descriptor 116: ==2743857== ==2743857== ==2743857== Open file descriptor 112: ==2743857== ==2743857== ==2743857== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==2743857== ==2743857== ==2743857== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2743857== ==2743857== ==2743857== ==2743857== HEAP SUMMARY: ==2743857== in use at exit: 701,152 bytes in 9,383 blocks ==2743857== total heap usage: 2,375,420 allocs, 2,366,037 frees, 2,483,505,830 bytes allocated ==2743857== ==2743857== LEAK SUMMARY: ==2743857== definitely lost: 0 bytes in 0 blocks ==2743857== indirectly lost: 0 bytes in 0 blocks ==2743857== possibly lost: 0 bytes in 0 blocks ==2743857== still reachable: 24 bytes in 2 blocks ==2743857== suppressed: 701,128 bytes in 9,381 blocks ==2743857== Reachable blocks (those to which a pointer was found) are not shown. ==2743857== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2743857== ==2743857== For lists of detected and suppressed errors, rerun with: -s ==2743857== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)