==2742807== Memcheck, a memory error detector ==2742807== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2742807== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2742807== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2742807== Parent PID: 2727455 ==2742807== ==2742807== ==2742807== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2742807== Open file descriptor 12: ==2742807== at 0xEB4F22D: pipe (pipe.c:29) ==2742807== by 0x18A0707D: ??? ==2742807== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2742807== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2742807== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2742807== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2742807== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2742807== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2742807== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2742807== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2742807== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2742807== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2742807== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2742807== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==2742807== ==2742807== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2742807== at 0xEB53BCC: __open_nocancel (open64_nocancel.c:39) ==2742807== by 0xEAD7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2742807== by 0xE48C822: ??? ==2742807== by 0xE48C96F: ??? ==2742807== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2742807== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2742807== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2742807== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2742807== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2742807== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2742807== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2742807== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2742807== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2742807== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2742807== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2742807== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2742807== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2742807== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2742807== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==2742807== ==2742807== Open file descriptor 116: ==2742807== ==2742807== ==2742807== Open file descriptor 112: ==2742807== ==2742807== ==2742807== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==2742807== ==2742807== ==2742807== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2742807== ==2742807== ==2742807== ==2742807== HEAP SUMMARY: ==2742807== in use at exit: 700,688 bytes in 9,374 blocks ==2742807== total heap usage: 5,180,252 allocs, 5,170,878 frees, 1,793,693,569 bytes allocated ==2742807== ==2742807== LEAK SUMMARY: ==2742807== definitely lost: 0 bytes in 0 blocks ==2742807== indirectly lost: 0 bytes in 0 blocks ==2742807== possibly lost: 0 bytes in 0 blocks ==2742807== still reachable: 56 bytes in 3 blocks ==2742807== suppressed: 700,632 bytes in 9,371 blocks ==2742807== Reachable blocks (those to which a pointer was found) are not shown. ==2742807== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2742807== ==2742807== For lists of detected and suppressed errors, rerun with: -s ==2742807== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)