==2728775== Memcheck, a memory error detector ==2728775== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2728775== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2728775== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2728775== Parent PID: 2727455 ==2728775== ==2728775== ==2728775== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2728775== Open file descriptor 12: ==2728775== at 0x103A322D: pipe (pipe.c:29) ==2728775== by 0x18A0507D: ??? ==2728775== by 0x13F6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2728775== by 0xFCAD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2728775== by 0xFC46D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2728775== by 0xE91DD38: PetscInitialize (pinit.c:924) ==2728775== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2728775== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2728775== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2728775== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2728775== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2728775== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2728775== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2728775== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2728775== ==2728775== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2728775== at 0x103A7BCC: __open_nocancel (open64_nocancel.c:39) ==2728775== by 0x1032BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2728775== by 0xFBA7822: ??? ==2728775== by 0xFBA796F: ??? ==2728775== by 0x140136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2728775== by 0x14013938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2728775== by 0x13FC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2728775== by 0x13F6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2728775== by 0xFCAD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2728775== by 0xFC46D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2728775== by 0xE91DD38: PetscInitialize (pinit.c:924) ==2728775== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2728775== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2728775== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2728775== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2728775== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2728775== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2728775== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2728775== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2728775== ==2728775== Open file descriptor 116: ==2728775== ==2728775== ==2728775== Open file descriptor 112: ==2728775== ==2728775== ==2728775== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==2728775== ==2728775== ==2728775== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2728775== ==2728775== ==2728775== ==2728775== HEAP SUMMARY: ==2728775== in use at exit: 700,688 bytes in 9,374 blocks ==2728775== total heap usage: 7,732,923 allocs, 7,723,549 frees, 2,197,586,754 bytes allocated ==2728775== ==2728775== LEAK SUMMARY: ==2728775== definitely lost: 0 bytes in 0 blocks ==2728775== indirectly lost: 0 bytes in 0 blocks ==2728775== possibly lost: 0 bytes in 0 blocks ==2728775== still reachable: 56 bytes in 3 blocks ==2728775== suppressed: 700,632 bytes in 9,371 blocks ==2728775== Reachable blocks (those to which a pointer was found) are not shown. ==2728775== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2728775== ==2728775== For lists of detected and suppressed errors, rerun with: -s ==2728775== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)