==2800229== Memcheck, a memory error detector ==2800229== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2800229== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2800229== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2800229== Parent PID: 2784933 ==2800229== ==2800229== ==2800229== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2800229== Open file descriptor 12: ==2800229== at 0x1037222D: pipe (pipe.c:29) ==2800229== by 0x18A0607D: ??? ==2800229== by 0x13FC74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800229== by 0xFB95418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800229== by 0xFB2ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800229== by 0xE825D38: PetscInitialize (pinit.c:924) ==2800229== by 0xE69B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800229== by 0xE69B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800229== by 0x2610BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800229== by 0x2597E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800229== by 0x25E366: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800229== by 0x25E207: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800229== by 0x25E89D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800229== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2800229== ==2800229== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2800229== at 0x10376BCC: __open_nocancel (open64_nocancel.c:39) ==2800229== by 0x102FAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2800229== by 0xE6CF822: ??? ==2800229== by 0xE6CF96F: ??? ==2800229== by 0x1406C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800229== by 0x1406C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800229== by 0x14022922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800229== by 0x13FC72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800229== by 0xFB95418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800229== by 0xFB2ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800229== by 0xE825D38: PetscInitialize (pinit.c:924) ==2800229== by 0xE69B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800229== by 0xE69B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800229== by 0x2610BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800229== by 0x2597E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800229== by 0x25E366: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800229== by 0x25E207: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800229== by 0x25E89D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800229== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2800229== ==2800229== Open file descriptor 116: ==2800229== ==2800229== ==2800229== Open file descriptor 112: ==2800229== ==2800229== ==2800229== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2800229== ==2800229== ==2800229== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2800229== ==2800229== ==2800229== ==2800229== HEAP SUMMARY: ==2800229== in use at exit: 700,688 bytes in 9,374 blocks ==2800229== total heap usage: 3,820,549 allocs, 3,811,175 frees, 1,524,931,791 bytes allocated ==2800229== ==2800229== LEAK SUMMARY: ==2800229== definitely lost: 0 bytes in 0 blocks ==2800229== indirectly lost: 0 bytes in 0 blocks ==2800229== possibly lost: 0 bytes in 0 blocks ==2800229== still reachable: 56 bytes in 3 blocks ==2800229== suppressed: 700,632 bytes in 9,371 blocks ==2800229== Reachable blocks (those to which a pointer was found) are not shown. ==2800229== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2800229== ==2800229== For lists of detected and suppressed errors, rerun with: -s ==2800229== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)