==2787391== Memcheck, a memory error detector ==2787391== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2787391== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2787391== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2787391== Parent PID: 2784933 ==2787391== ==2787391== ==2787391== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2787391== Open file descriptor 12: ==2787391== at 0xF0F622D: pipe (pipe.c:29) ==2787391== by 0x18A0507D: ??? ==2787391== by 0x141304CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2787391== by 0x10D52418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2787391== by 0x10CEBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2787391== by 0xF9E2D38: PetscInitialize (pinit.c:924) ==2787391== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2787391== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2787391== by 0x1D24BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2787391== by 0x1CBE51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2787391== by 0x1CF5EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2787391== by 0x1CF48C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2787391== by 0x1CFB23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2787391== by 0x1CA235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2787391== ==2787391== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2787391== at 0xF0FABCC: __open_nocancel (open64_nocancel.c:39) ==2787391== by 0xF07EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2787391== by 0xE48C822: ??? ==2787391== by 0xE48C96F: ??? ==2787391== by 0x141D56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2787391== by 0x141D5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2787391== by 0x1418B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2787391== by 0x141302DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2787391== by 0x10D52418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2787391== by 0x10CEBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2787391== by 0xF9E2D38: PetscInitialize (pinit.c:924) ==2787391== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2787391== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2787391== by 0x1D24BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2787391== by 0x1CBE51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2787391== by 0x1CF5EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2787391== by 0x1CF48C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2787391== by 0x1CFB23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2787391== by 0x1CA235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2787391== ==2787391== Open file descriptor 116: ==2787391== ==2787391== ==2787391== Open file descriptor 112: ==2787391== ==2787391== ==2787391== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==2787391== ==2787391== ==2787391== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2787391== ==2787391== ==2787391== ==2787391== HEAP SUMMARY: ==2787391== in use at exit: 700,688 bytes in 9,374 blocks ==2787391== total heap usage: 7,097,352 allocs, 7,087,978 frees, 8,099,009,302 bytes allocated ==2787391== ==2787391== LEAK SUMMARY: ==2787391== definitely lost: 0 bytes in 0 blocks ==2787391== indirectly lost: 0 bytes in 0 blocks ==2787391== possibly lost: 0 bytes in 0 blocks ==2787391== still reachable: 56 bytes in 3 blocks ==2787391== suppressed: 700,632 bytes in 9,371 blocks ==2787391== Reachable blocks (those to which a pointer was found) are not shown. ==2787391== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2787391== ==2787391== For lists of detected and suppressed errors, rerun with: -s ==2787391== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)