==2801000== Memcheck, a memory error detector ==2801000== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2801000== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2801000== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2801000== Parent PID: 2784933 ==2801000== ==2801000== ==2801000== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2801000== Open file descriptor 12: ==2801000== at 0x118C622D: pipe (pipe.c:29) ==2801000== by 0x1A6C707D: ??? ==2801000== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2801000== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2801000== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2801000== by 0xFE40D38: PetscInitialize (pinit.c:924) ==2801000== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2801000== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2801000== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2801000== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2801000== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2801000== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2801000== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2801000== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==2801000== ==2801000== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2801000== at 0x118CABCC: __open_nocancel (open64_nocancel.c:39) ==2801000== by 0x1184EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2801000== by 0x110CA822: ??? ==2801000== by 0x110CA96F: ??? ==2801000== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2801000== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2801000== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2801000== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2801000== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2801000== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2801000== by 0xFE40D38: PetscInitialize (pinit.c:924) ==2801000== by 0xFD180B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2801000== by 0xFD18101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2801000== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2801000== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2801000== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2801000== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2801000== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2801000== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==2801000== ==2801000== Open file descriptor 116: ==2801000== ==2801000== ==2801000== Open file descriptor 112: ==2801000== ==2801000== ==2801000== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==2801000== ==2801000== ==2801000== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2801000== ==2801000== ==2801000== ==2801000== HEAP SUMMARY: ==2801000== in use at exit: 700,775 bytes in 9,378 blocks ==2801000== total heap usage: 1,755,601 allocs, 1,746,223 frees, 1,530,074,391 bytes allocated ==2801000== ==2801000== LEAK SUMMARY: ==2801000== definitely lost: 0 bytes in 0 blocks ==2801000== indirectly lost: 0 bytes in 0 blocks ==2801000== possibly lost: 0 bytes in 0 blocks ==2801000== still reachable: 56 bytes in 3 blocks ==2801000== suppressed: 700,719 bytes in 9,375 blocks ==2801000== Reachable blocks (those to which a pointer was found) are not shown. ==2801000== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2801000== ==2801000== For lists of detected and suppressed errors, rerun with: -s ==2801000== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)