==2800601== Memcheck, a memory error detector ==2800601== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2800601== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2800601== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2800601== Parent PID: 2784933 ==2800601== ==2800601== ==2800601== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2800601== Open file descriptor 12: ==2800601== at 0x11B4B22D: pipe (pipe.c:29) ==2800601== by 0x1A6C607D: ??? ==2800601== by 0x1587B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800601== by 0x11457418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800601== by 0x113F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800601== by 0x100E5D38: PetscInitialize (pinit.c:924) ==2800601== by 0xFF5B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800601== by 0xFF5B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800601== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800601== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800601== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800601== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800601== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800601== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2800601== ==2800601== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2800601== at 0x11B4FBCC: __open_nocancel (open64_nocancel.c:39) ==2800601== by 0x11AD3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2800601== by 0xFF8F822: ??? ==2800601== by 0xFF8F96F: ??? ==2800601== by 0x159206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800601== by 0x15920938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800601== by 0x158D6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2800601== by 0x1587B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2800601== by 0x11457418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800601== by 0x113F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2800601== by 0x100E5D38: PetscInitialize (pinit.c:924) ==2800601== by 0xFF5B0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2800601== by 0xFF5B101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2800601== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2800601== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2800601== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2800601== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2800601== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2800601== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2800601== ==2800601== Open file descriptor 116: ==2800601== ==2800601== ==2800601== Open file descriptor 112: ==2800601== ==2800601== ==2800601== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==2800601== ==2800601== ==2800601== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2800601== ==2800601== ==2800601== ==2800601== HEAP SUMMARY: ==2800601== in use at exit: 700,743 bytes in 9,377 blocks ==2800601== total heap usage: 521,213 allocs, 511,836 frees, 1,562,160,057 bytes allocated ==2800601== ==2800601== LEAK SUMMARY: ==2800601== definitely lost: 0 bytes in 0 blocks ==2800601== indirectly lost: 0 bytes in 0 blocks ==2800601== possibly lost: 0 bytes in 0 blocks ==2800601== still reachable: 24 bytes in 2 blocks ==2800601== suppressed: 700,719 bytes in 9,375 blocks ==2800601== Reachable blocks (those to which a pointer was found) are not shown. ==2800601== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2800601== ==2800601== For lists of detected and suppressed errors, rerun with: -s ==2800601== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 43 from 43)