==2927614== Memcheck, a memory error detector ==2927614== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2927614== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2927614== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==2927614== Parent PID: 2911187 ==2927614== ==2927614== ==2927614== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2927614== Open file descriptor 12: ==2927614== at 0x6BCC22D: pipe (pipe.c:29) ==2927614== by 0x1078407D: ??? ==2927614== by 0xBAA54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927614== by 0x5ED3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927614== by 0x5E6CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927614== by 0x4B43D38: PetscInitialize (pinit.c:924) ==2927614== by 0x4A1823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927614== by 0x4A1828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927614== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2927614== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927614== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927614== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927614== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927614== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==2927614== ==2927614== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2927614== at 0x6BD0BCC: __open_nocancel (open64_nocancel.c:39) ==2927614== by 0x6B54C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2927614== by 0x5DCD822: ??? ==2927614== by 0x5DCD96F: ??? ==2927614== by 0xBB4A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927614== by 0xBB4A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927614== by 0xBB00922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927614== by 0xBAA52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927614== by 0x5ED3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927614== by 0x5E6CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927614== by 0x4B43D38: PetscInitialize (pinit.c:924) ==2927614== by 0x4A1823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927614== by 0x4A1828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927614== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2927614== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927614== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927614== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927614== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927614== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==2927614== ==2927614== Open file descriptor 116: ==2927614== ==2927614== ==2927614== Open file descriptor 112: ==2927614== ==2927614== ==2927614== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==2927614== ==2927614== ==2927614== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2927614== ==2927614== ==2927614== ==2927614== HEAP SUMMARY: ==2927614== in use at exit: 700,727 bytes in 9,377 blocks ==2927614== total heap usage: 629,512 allocs, 620,135 frees, 1,802,133,663 bytes allocated ==2927614== ==2927614== LEAK SUMMARY: ==2927614== definitely lost: 0 bytes in 0 blocks ==2927614== indirectly lost: 0 bytes in 0 blocks ==2927614== possibly lost: 0 bytes in 0 blocks ==2927614== still reachable: 24 bytes in 2 blocks ==2927614== suppressed: 700,703 bytes in 9,375 blocks ==2927614== Reachable blocks (those to which a pointer was found) are not shown. ==2927614== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2927614== ==2927614== For lists of detected and suppressed errors, rerun with: -s ==2927614== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)