==2912463== Memcheck, a memory error detector ==2912463== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2912463== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2912463== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==2912463== Parent PID: 2911187 ==2912463== ==2912463== ==2912463== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2912463== Open file descriptor 12: ==2912463== at 0xF8B122D: pipe (pipe.c:29) ==2912463== by 0x1976707D: ??? ==2912463== by 0x14D704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2912463== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912463== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912463== by 0x101E1D38: PetscInitialize (pinit.c:924) ==2912463== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2912463== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2912463== by 0x1238A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2912463== by 0x11E94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2912463== by 0x121468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2912463== by 0x121308: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2912463== by 0x12199F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2912463== by 0x11CD75: main (TestCellsGenerator.cpp:19) ==2912463== ==2912463== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2912463== at 0xF8B5BCC: __open_nocancel (open64_nocancel.c:39) ==2912463== by 0xF839C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2912463== by 0xF1EE822: ??? ==2912463== by 0xF1EE96F: ??? ==2912463== by 0x14E156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912463== by 0x14E15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912463== by 0x14DCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912463== by 0x14D702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2912463== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912463== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912463== by 0x101E1D38: PetscInitialize (pinit.c:924) ==2912463== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2912463== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2912463== by 0x1238A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2912463== by 0x11E94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2912463== by 0x121468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2912463== by 0x121308: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2912463== by 0x12199F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2912463== by 0x11CD75: main (TestCellsGenerator.cpp:19) ==2912463== ==2912463== Open file descriptor 116: ==2912463== ==2912463== ==2912463== Open file descriptor 112: ==2912463== ==2912463== ==2912463== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==2912463== ==2912463== ==2912463== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2912463== ==2912463== ==2912463== ==2912463== HEAP SUMMARY: ==2912463== in use at exit: 700,823 bytes in 9,379 blocks ==2912463== total heap usage: 71,740 allocs, 62,361 frees, 1,355,788,852 bytes allocated ==2912463== ==2912463== LEAK SUMMARY: ==2912463== definitely lost: 0 bytes in 0 blocks ==2912463== indirectly lost: 0 bytes in 0 blocks ==2912463== possibly lost: 0 bytes in 0 blocks ==2912463== still reachable: 120 bytes in 4 blocks ==2912463== suppressed: 700,703 bytes in 9,375 blocks ==2912463== Reachable blocks (those to which a pointer was found) are not shown. ==2912463== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2912463== ==2912463== For lists of detected and suppressed errors, rerun with: -s ==2912463== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)