==2927773== Memcheck, a memory error detector ==2927773== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2927773== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2927773== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==2927773== Parent PID: 2911187 ==2927773== ==2927773== ==2927773== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2927773== Open file descriptor 12: ==2927773== at 0xABD122D: pipe (pipe.c:29) ==2927773== by 0x1430B07D: ??? ==2927773== by 0xFB0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927773== by 0xC2CB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927773== by 0xC264D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927773== by 0xAF5BD38: PetscInitialize (pinit.c:924) ==2927773== by 0xA4BD23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927773== by 0xA4BD28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927773== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2927773== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927773== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927773== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927773== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927773== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==2927773== ==2927773== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2927773== at 0xABD5BCC: __open_nocancel (open64_nocancel.c:39) ==2927773== by 0xAB59C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2927773== by 0xA4F2822: ??? ==2927773== by 0xA4F296F: ??? ==2927773== by 0xFBB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927773== by 0xFBB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927773== by 0xFB68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927773== by 0xFB0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927773== by 0xC2CB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927773== by 0xC264D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927773== by 0xAF5BD38: PetscInitialize (pinit.c:924) ==2927773== by 0xA4BD23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927773== by 0xA4BD28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927773== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2927773== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927773== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927773== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927773== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927773== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==2927773== ==2927773== Open file descriptor 116: ==2927773== ==2927773== ==2927773== Open file descriptor 112: ==2927773== ==2927773== ==2927773== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==2927773== ==2927773== ==2927773== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2927773== ==2927773== ==2927773== ==2927773== HEAP SUMMARY: ==2927773== in use at exit: 701,223 bytes in 9,387 blocks ==2927773== total heap usage: 468,454 allocs, 459,067 frees, 1,461,242,790 bytes allocated ==2927773== ==2927773== LEAK SUMMARY: ==2927773== definitely lost: 0 bytes in 0 blocks ==2927773== indirectly lost: 0 bytes in 0 blocks ==2927773== possibly lost: 0 bytes in 0 blocks ==2927773== still reachable: 24 bytes in 2 blocks ==2927773== suppressed: 701,199 bytes in 9,385 blocks ==2927773== Reachable blocks (those to which a pointer was found) are not shown. ==2927773== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2927773== ==2927773== For lists of detected and suppressed errors, rerun with: -s ==2927773== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)