==2917766== Memcheck, a memory error detector ==2917766== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2917766== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2917766== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2917766== Parent PID: 2911187 ==2917766== ==2917766== ==2917766== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2917766== Open file descriptor 12: ==2917766== at 0xFD3722D: pipe (pipe.c:29) ==2917766== by 0x1976807D: ??? ==2917766== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2917766== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917766== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917766== by 0x102C8D38: PetscInitialize (pinit.c:924) ==2917766== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2917766== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2917766== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2917766== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2917766== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2917766== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2917766== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2917766== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==2917766== ==2917766== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2917766== at 0xFD3BBCC: __open_nocancel (open64_nocancel.c:39) ==2917766== by 0xFCBFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2917766== by 0xF58B822: ??? ==2917766== by 0xF58B96F: ??? ==2917766== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917766== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917766== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917766== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2917766== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917766== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917766== by 0x102C8D38: PetscInitialize (pinit.c:924) ==2917766== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2917766== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2917766== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2917766== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2917766== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2917766== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2917766== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2917766== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==2917766== ==2917766== Open file descriptor 116: ==2917766== ==2917766== ==2917766== Open file descriptor 112: ==2917766== ==2917766== ==2917766== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==2917766== ==2917766== ==2917766== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2917766== ==2917766== ==2917766== ==2917766== HEAP SUMMARY: ==2917766== in use at exit: 700,759 bytes in 9,378 blocks ==2917766== total heap usage: 2,359,112 allocs, 2,349,734 frees, 1,791,569,231 bytes allocated ==2917766== ==2917766== LEAK SUMMARY: ==2917766== definitely lost: 0 bytes in 0 blocks ==2917766== indirectly lost: 0 bytes in 0 blocks ==2917766== possibly lost: 0 bytes in 0 blocks ==2917766== still reachable: 56 bytes in 3 blocks ==2917766== suppressed: 700,703 bytes in 9,375 blocks ==2917766== Reachable blocks (those to which a pointer was found) are not shown. ==2917766== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2917766== ==2917766== For lists of detected and suppressed errors, rerun with: -s ==2917766== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)