==2912503== Memcheck, a memory error detector ==2912503== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2912503== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2912503== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==2912503== Parent PID: 2911187 ==2912503== ==2912503== ==2912503== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2912503== Open file descriptor 12: ==2912503== at 0xEE2622D: pipe (pipe.c:29) ==2912503== by 0x1976707D: ??? ==2912503== by 0x13CB84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2912503== by 0xEA77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912503== by 0xEA10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912503== by 0xD707D38: PetscInitialize (pinit.c:924) ==2912503== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2912503== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2912503== by 0x137FA7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2912503== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2912503== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2912503== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2912503== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2912503== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==2912503== ==2912503== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2912503== at 0xEE2ABCC: __open_nocancel (open64_nocancel.c:39) ==2912503== by 0xEDAEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2912503== by 0xD5AF822: ??? ==2912503== by 0xD5AF96F: ??? ==2912503== by 0x13D5D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912503== by 0x13D5D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912503== by 0x13D13922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2912503== by 0x13CB82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2912503== by 0xEA77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912503== by 0xEA10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2912503== by 0xD707D38: PetscInitialize (pinit.c:924) ==2912503== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2912503== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2912503== by 0x137FA7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2912503== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2912503== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2912503== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2912503== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2912503== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==2912503== ==2912503== Open file descriptor 116: ==2912503== ==2912503== ==2912503== Open file descriptor 112: ==2912503== ==2912503== ==2912503== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==2912503== ==2912503== ==2912503== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2912503== ==2912503== ==2912503== ==2912503== HEAP SUMMARY: ==2912503== in use at exit: 700,791 bytes in 9,379 blocks ==2912503== total heap usage: 81,266 allocs, 71,887 frees, 1,357,343,710 bytes allocated ==2912503== ==2912503== LEAK SUMMARY: ==2912503== definitely lost: 0 bytes in 0 blocks ==2912503== indirectly lost: 0 bytes in 0 blocks ==2912503== possibly lost: 0 bytes in 0 blocks ==2912503== still reachable: 88 bytes in 4 blocks ==2912503== suppressed: 700,703 bytes in 9,375 blocks ==2912503== Reachable blocks (those to which a pointer was found) are not shown. ==2912503== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2912503== ==2912503== For lists of detected and suppressed errors, rerun with: -s ==2912503== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)