==2913069== Memcheck, a memory error detector ==2913069== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2913069== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2913069== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestT2SwapCellKiller -malloc_debug -malloc_dump -memory_info ==2913069== Parent PID: 2911187 ==2913069== ==2913069== ==2913069== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2913069== Open file descriptor 12: ==2913069== at 0x10DAA22D: pipe (pipe.c:29) ==2913069== by 0x1976707D: ??? ==2913069== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2913069== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2913069== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2913069== by 0xF344D38: PetscInitialize (pinit.c:924) ==2913069== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2913069== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2913069== by 0x149A5D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2913069== by 0x142711: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2913069== by 0x14553C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2913069== by 0x1453DC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2913069== by 0x145A73: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2913069== by 0x140AF5: main (TestT2SwapCellKiller.cpp:19) ==2913069== ==2913069== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2913069== at 0x10DAEBCC: __open_nocancel (open64_nocancel.c:39) ==2913069== by 0x10D32C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2913069== by 0xF1EE822: ??? ==2913069== by 0xF1EE96F: ??? ==2913069== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2913069== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2913069== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2913069== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2913069== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2913069== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2913069== by 0xF344D38: PetscInitialize (pinit.c:924) ==2913069== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2913069== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2913069== by 0x149A5D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2913069== by 0x142711: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2913069== by 0x14553C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2913069== by 0x1453DC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2913069== by 0x145A73: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2913069== by 0x140AF5: main (TestT2SwapCellKiller.cpp:19) ==2913069== ==2913069== Open file descriptor 116: ==2913069== ==2913069== ==2913069== Open file descriptor 112: ==2913069== ==2913069== ==2913069== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestT2SwapCellKiller_valgrind.txt ==2913069== ==2913069== ==2913069== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2913069== ==2913069== ==2913069== ==2913069== HEAP SUMMARY: ==2913069== in use at exit: 700,759 bytes in 9,378 blocks ==2913069== total heap usage: 81,213 allocs, 71,835 frees, 1,358,919,750 bytes allocated ==2913069== ==2913069== LEAK SUMMARY: ==2913069== definitely lost: 0 bytes in 0 blocks ==2913069== indirectly lost: 0 bytes in 0 blocks ==2913069== possibly lost: 0 bytes in 0 blocks ==2913069== still reachable: 56 bytes in 3 blocks ==2913069== suppressed: 700,703 bytes in 9,375 blocks ==2913069== Reachable blocks (those to which a pointer was found) are not shown. ==2913069== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2913069== ==2913069== For lists of detected and suppressed errors, rerun with: -s ==2913069== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)