==2927033== Memcheck, a memory error detector ==2927033== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2927033== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2927033== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2927033== Parent PID: 2911187 ==2927033== ==2927033== ==2927033== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2927033== Open file descriptor 12: ==2927033== at 0x128AD22D: pipe (pipe.c:29) ==2927033== by 0x1B42807D: ??? ==2927033== by 0x165E14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927033== by 0x121B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927033== by 0x12152D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927033== by 0x10E47D38: PetscInitialize (pinit.c:924) ==2927033== by 0x10CBC23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927033== by 0x10CBC28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927033== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2927033== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927033== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927033== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927033== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927033== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2927033== ==2927033== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2927033== at 0x128B1BCC: __open_nocancel (open64_nocancel.c:39) ==2927033== by 0x12835C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2927033== by 0x10CF1822: ??? ==2927033== by 0x10CF196F: ??? ==2927033== by 0x166866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927033== by 0x16686938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927033== by 0x1663C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2927033== by 0x165E12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2927033== by 0x121B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927033== by 0x12152D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2927033== by 0x10E47D38: PetscInitialize (pinit.c:924) ==2927033== by 0x10CBC23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2927033== by 0x10CBC28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2927033== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2927033== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2927033== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2927033== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2927033== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2927033== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2927033== ==2927033== Open file descriptor 116: ==2927033== ==2927033== ==2927033== Open file descriptor 112: ==2927033== ==2927033== ==2927033== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==2927033== ==2927033== ==2927033== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2927033== ==2927033== ==2927033== ==2927033== HEAP SUMMARY: ==2927033== in use at exit: 700,743 bytes in 9,377 blocks ==2927033== total heap usage: 521,785 allocs, 512,408 frees, 1,562,203,695 bytes allocated ==2927033== ==2927033== LEAK SUMMARY: ==2927033== definitely lost: 0 bytes in 0 blocks ==2927033== indirectly lost: 0 bytes in 0 blocks ==2927033== possibly lost: 0 bytes in 0 blocks ==2927033== still reachable: 24 bytes in 2 blocks ==2927033== suppressed: 700,719 bytes in 9,375 blocks ==2927033== Reachable blocks (those to which a pointer was found) are not shown. ==2927033== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2927033== ==2927033== For lists of detected and suppressed errors, rerun with: -s ==2927033== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)