==78858== Memcheck, a memory error detector ==78858== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==78858== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==78858== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==78858== Parent PID: 77187 ==78858== ==78858== ==78858== FILE DESCRIPTORS: 9 open (3 std) at exit. ==78858== Open file descriptor 12: ==78858== at 0xDCB622D: pipe (pipe.c:29) ==78858== by 0x1976707D: ??? ==78858== by 0x14D6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78858== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78858== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78858== by 0x101E1D38: PetscInitialize (pinit.c:924) ==78858== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78858== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78858== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==78858== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78858== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78858== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78858== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78858== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==78858== ==78858== Open file descriptor 8: /dev/shm/open_mpi.0000 ==78858== at 0xDCBABCC: __open_nocancel (open64_nocancel.c:39) ==78858== by 0xDC3EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==78858== by 0xD5AF822: ??? ==78858== by 0xD5AF96F: ??? ==78858== by 0x14E136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78858== by 0x14E13938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78858== by 0x14DC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78858== by 0x14D6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78858== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78858== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78858== by 0x101E1D38: PetscInitialize (pinit.c:924) ==78858== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78858== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78858== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==78858== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78858== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78858== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78858== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78858== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==78858== ==78858== Open file descriptor 112: ==78858== ==78858== ==78858== Open file descriptor 109: ==78858== ==78858== ==78858== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==78858== ==78858== ==78858== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==78858== ==78858== ==78858== ==78858== HEAP SUMMARY: ==78858== in use at exit: 700,749 bytes in 9,378 blocks ==78858== total heap usage: 58,057 allocs, 48,679 frees, 1,354,263,674 bytes allocated ==78858== ==78858== LEAK SUMMARY: ==78858== definitely lost: 0 bytes in 0 blocks ==78858== indirectly lost: 0 bytes in 0 blocks ==78858== possibly lost: 0 bytes in 0 blocks ==78858== still reachable: 56 bytes in 3 blocks ==78858== suppressed: 700,693 bytes in 9,375 blocks ==78858== Reachable blocks (those to which a pointer was found) are not shown. ==78858== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==78858== ==78858== For lists of detected and suppressed errors, rerun with: -s ==78858== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)