==78859== Memcheck, a memory error detector ==78859== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==78859== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==78859== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==78859== Parent PID: 77187 ==78859== ==78859== ==78859== FILE DESCRIPTORS: 9 open (3 std) at exit. ==78859== Open file descriptor 12: ==78859== at 0x10E9122D: pipe (pipe.c:29) ==78859== by 0x1976707D: ??? ==78859== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78859== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78859== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78859== by 0xF344D38: PetscInitialize (pinit.c:924) ==78859== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78859== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78859== by 0x1A5375: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==78859== by 0x19D291: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78859== by 0x1A08D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78859== by 0x1A0774: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78859== by 0x1A0E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78859== by 0x19B675: main (TestCellKillers.cpp:19) ==78859== ==78859== Open file descriptor 8: /dev/shm/open_mpi.0000 ==78859== at 0x10E95BCC: __open_nocancel (open64_nocancel.c:39) ==78859== by 0x10E19C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==78859== by 0xF1EE822: ??? ==78859== by 0xF1EE96F: ??? ==78859== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78859== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78859== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78859== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78859== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78859== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78859== by 0xF344D38: PetscInitialize (pinit.c:924) ==78859== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78859== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78859== by 0x1A5375: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==78859== by 0x19D291: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78859== by 0x1A08D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78859== by 0x1A0774: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78859== by 0x1A0E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78859== by 0x19B675: main (TestCellKillers.cpp:19) ==78859== ==78859== Open file descriptor 112: ==78859== ==78859== ==78859== Open file descriptor 109: ==78859== ==78859== ==78859== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==78859== ==78859== ==78859== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==78859== ==78859== ==78859== ==78859== HEAP SUMMARY: ==78859== in use at exit: 700,749 bytes in 9,378 blocks ==78859== total heap usage: 122,068 allocs, 112,690 frees, 1,359,226,874 bytes allocated ==78859== ==78859== LEAK SUMMARY: ==78859== definitely lost: 0 bytes in 0 blocks ==78859== indirectly lost: 0 bytes in 0 blocks ==78859== possibly lost: 0 bytes in 0 blocks ==78859== still reachable: 56 bytes in 3 blocks ==78859== suppressed: 700,693 bytes in 9,375 blocks ==78859== Reachable blocks (those to which a pointer was found) are not shown. ==78859== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==78859== ==78859== For lists of detected and suppressed errors, rerun with: -s ==78859== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)