==78417== Memcheck, a memory error detector ==78417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==78417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==78417== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==78417== Parent PID: 77187 ==78417== ==78417== ==78417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==78417== Open file descriptor 12: ==78417== at 0xEDE422D: pipe (pipe.c:29) ==78417== by 0x1976707D: ??? ==78417== by 0x13CB84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78417== by 0xEA35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78417== by 0xE9CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78417== by 0xD6A5D38: PetscInitialize (pinit.c:924) ==78417== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78417== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78417== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==78417== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78417== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78417== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78417== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78417== by 0x113935: main (TestCellSrn.cpp:18) ==78417== ==78417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==78417== at 0xEDE8BCC: __open_nocancel (open64_nocancel.c:39) ==78417== by 0xED6CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==78417== by 0xE92F822: ??? ==78417== by 0xE92F96F: ??? ==78417== by 0x13D5D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78417== by 0x13D5D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78417== by 0x13D13922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==78417== by 0x13CB82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==78417== by 0xEA35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78417== by 0xE9CED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==78417== by 0xD6A5D38: PetscInitialize (pinit.c:924) ==78417== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==78417== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==78417== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==78417== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==78417== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==78417== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==78417== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==78417== by 0x113935: main (TestCellSrn.cpp:18) ==78417== ==78417== Open file descriptor 112: ==78417== ==78417== ==78417== Open file descriptor 109: ==78417== ==78417== ==78417== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==78417== ==78417== ==78417== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==78417== ==78417== ==78417== ==78417== HEAP SUMMARY: ==78417== in use at exit: 700,813 bytes in 9,379 blocks ==78417== total heap usage: 65,668 allocs, 56,289 frees, 1,354,468,204 bytes allocated ==78417== ==78417== LEAK SUMMARY: ==78417== definitely lost: 0 bytes in 0 blocks ==78417== indirectly lost: 0 bytes in 0 blocks ==78417== possibly lost: 0 bytes in 0 blocks ==78417== still reachable: 120 bytes in 4 blocks ==78417== suppressed: 700,693 bytes in 9,375 blocks ==78417== Reachable blocks (those to which a pointer was found) are not shown. ==78417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==78417== ==78417== For lists of detected and suppressed errors, rerun with: -s ==78417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)