==93135== Memcheck, a memory error detector ==93135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==93135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==93135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==93135== Parent PID: 77187 ==93135== ==93135== ==93135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==93135== Open file descriptor 12: ==93135== at 0x1129C22D: pipe (pipe.c:29) ==93135== by 0x1B42B07D: ??? ==93135== by 0x1662B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93135== by 0x12EF8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93135== by 0x12E91D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93135== by 0x11B88D38: PetscInitialize (pinit.c:924) ==93135== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93135== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93135== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==93135== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93135== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93135== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93135== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93135== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==93135== ==93135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==93135== at 0x112A0BCC: __open_nocancel (open64_nocancel.c:39) ==93135== by 0x11224C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==93135== by 0x10AAE822: ??? ==93135== by 0x10AAE96F: ??? ==93135== by 0x166D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93135== by 0x166D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93135== by 0x16686922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93135== by 0x1662B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93135== by 0x12EF8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93135== by 0x12E91D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93135== by 0x11B88D38: PetscInitialize (pinit.c:924) ==93135== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93135== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93135== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==93135== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93135== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93135== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93135== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93135== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==93135== ==93135== Open file descriptor 112: ==93135== ==93135== ==93135== Open file descriptor 109: ==93135== ==93135== ==93135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==93135== ==93135== ==93135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==93135== ==93135== ==93135== ==93135== HEAP SUMMARY: ==93135== in use at exit: 700,700 bytes in 9,374 blocks ==93135== total heap usage: 6,310,231 allocs, 6,300,857 frees, 2,072,761,724 bytes allocated ==93135== ==93135== LEAK SUMMARY: ==93135== definitely lost: 0 bytes in 0 blocks ==93135== indirectly lost: 0 bytes in 0 blocks ==93135== possibly lost: 0 bytes in 0 blocks ==93135== still reachable: 56 bytes in 3 blocks ==93135== suppressed: 700,644 bytes in 9,371 blocks ==93135== Reachable blocks (those to which a pointer was found) are not shown. ==93135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==93135== ==93135== For lists of detected and suppressed errors, rerun with: -s ==93135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)