==77450== Memcheck, a memory error detector ==77450== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==77450== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==77450== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestHdf5DataReader -malloc_debug -malloc_dump -memory_info ==77450== Parent PID: 77187 ==77450== ==77450== ==77450== FILE DESCRIPTORS: 9 open (3 std) at exit. ==77450== Open file descriptor 12: ==77450== at 0x645522D: pipe (pipe.c:29) ==77450== by 0xAF1507D: ??? ==77450== by 0x8F354CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==77450== by 0x664F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==77450== by 0x65E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==77450== by 0x4A96D38: PetscInitialize (pinit.c:924) ==77450== by 0x496D23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==77450== by 0x496D28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==77450== by 0x11BB1C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==77450== by 0x117033: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==77450== by 0x119B8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==77450== by 0x119A2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==77450== by 0x11A0C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==77450== by 0x1151B5: main (TestHdf5DataReader.cpp:19) ==77450== ==77450== Open file descriptor 8: /dev/shm/open_mpi.0000 ==77450== at 0x6459BCC: __open_nocancel (open64_nocancel.c:39) ==77450== by 0x63DDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==77450== by 0x5D20822: ??? ==77450== by 0x5D2096F: ??? ==77450== by 0x8FDA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==77450== by 0x8FDA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==77450== by 0x8F90922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==77450== by 0x8F352DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==77450== by 0x664F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==77450== by 0x65E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==77450== by 0x4A96D38: PetscInitialize (pinit.c:924) ==77450== by 0x496D23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==77450== by 0x496D28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==77450== by 0x11BB1C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==77450== by 0x117033: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==77450== by 0x119B8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==77450== by 0x119A2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==77450== by 0x11A0C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==77450== by 0x1151B5: main (TestHdf5DataReader.cpp:19) ==77450== ==77450== Open file descriptor 112: ==77450== ==77450== ==77450== Open file descriptor 109: ==77450== ==77450== ==77450== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5DataReader_valgrind.txt ==77450== ==77450== ==77450== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==77450== ==77450== ==77450== ==77450== HEAP SUMMARY: ==77450== in use at exit: 700,749 bytes in 9,387 blocks ==77450== total heap usage: 60,795 allocs, 51,408 frees, 1,363,849,027 bytes allocated ==77450== ==77450== LEAK SUMMARY: ==77450== definitely lost: 0 bytes in 0 blocks ==77450== indirectly lost: 0 bytes in 0 blocks ==77450== possibly lost: 0 bytes in 0 blocks ==77450== still reachable: 24 bytes in 2 blocks ==77450== suppressed: 700,725 bytes in 9,385 blocks ==77450== Reachable blocks (those to which a pointer was found) are not shown. ==77450== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==77450== ==77450== For lists of detected and suppressed errors, rerun with: -s ==77450== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 41 from 35)