==79003== Memcheck, a memory error detector ==79003== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==79003== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==79003== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==79003== Parent PID: 77187 ==79003== ==79003== ==79003== FILE DESCRIPTORS: 9 open (3 std) at exit. ==79003== Open file descriptor 12: ==79003== at 0xF98422D: pipe (pipe.c:29) ==79003== by 0x1976707D: ??? ==79003== by 0x14D704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79003== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79003== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79003== by 0x101DFD38: PetscInitialize (pinit.c:924) ==79003== by 0xF24823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79003== by 0xF24828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79003== by 0x2E25BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79003== by 0x2D90B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79003== by 0x2DD90E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79003== by 0x2DD7AE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79003== by 0x2DDE45: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79003== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==79003== ==79003== Open file descriptor 8: /dev/shm/open_mpi.0000 ==79003== at 0xF988BCC: __open_nocancel (open64_nocancel.c:39) ==79003== by 0xF90CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==79003== by 0xF27D822: ??? ==79003== by 0xF27D96F: ??? ==79003== by 0x14E156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79003== by 0x14E15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79003== by 0x14DCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79003== by 0x14D702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79003== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79003== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79003== by 0x101DFD38: PetscInitialize (pinit.c:924) ==79003== by 0xF24823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79003== by 0xF24828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79003== by 0x2E25BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79003== by 0x2D90B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79003== by 0x2DD90E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79003== by 0x2DD7AE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79003== by 0x2DDE45: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79003== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==79003== ==79003== Open file descriptor 112: ==79003== ==79003== ==79003== Open file descriptor 109: ==79003== ==79003== ==79003== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==79003== ==79003== ==79003== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==79003== ==79003== ==79003== ==79003== HEAP SUMMARY: ==79003== in use at exit: 700,684 bytes in 9,374 blocks ==79003== total heap usage: 20,194,956 allocs, 20,185,582 frees, 2,578,068,464 bytes allocated ==79003== ==79003== LEAK SUMMARY: ==79003== definitely lost: 0 bytes in 0 blocks ==79003== indirectly lost: 0 bytes in 0 blocks ==79003== possibly lost: 0 bytes in 0 blocks ==79003== still reachable: 56 bytes in 3 blocks ==79003== suppressed: 700,628 bytes in 9,371 blocks ==79003== Reachable blocks (those to which a pointer was found) are not shown. ==79003== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==79003== ==79003== For lists of detected and suppressed errors, rerun with: -s ==79003== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)