==92944== Memcheck, a memory error detector ==92944== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==92944== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==92944== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==92944== Parent PID: 77187 ==92944== ==92944== ==92944== FILE DESCRIPTORS: 9 open (3 std) at exit. ==92944== Open file descriptor 12: ==92944== at 0x10C7022D: pipe (pipe.c:29) ==92944== by 0x1B42B07D: ??? ==92944== by 0x155CB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92944== by 0x1057A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92944== by 0x10513D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92944== by 0xF20AD38: PetscInitialize (pinit.c:924) ==92944== by 0xF07F23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92944== by 0xF07F28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92944== by 0x1926A1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92944== by 0x18A643: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92944== by 0x18DC40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92944== by 0x18DAE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92944== by 0x18E177: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92944== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==92944== ==92944== Open file descriptor 8: /dev/shm/open_mpi.0000 ==92944== at 0x10C74BCC: __open_nocancel (open64_nocancel.c:39) ==92944== by 0x10BF8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==92944== by 0xF0B4822: ??? ==92944== by 0xF0B496F: ??? ==92944== by 0x156706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92944== by 0x15670938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92944== by 0x15626922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92944== by 0x155CB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92944== by 0x1057A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92944== by 0x10513D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92944== by 0xF20AD38: PetscInitialize (pinit.c:924) ==92944== by 0xF07F23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92944== by 0xF07F28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92944== by 0x1926A1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92944== by 0x18A643: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92944== by 0x18DC40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92944== by 0x18DAE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92944== by 0x18E177: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92944== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==92944== ==92944== Open file descriptor 112: ==92944== ==92944== ==92944== Open file descriptor 109: ==92944== ==92944== ==92944== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==92944== ==92944== ==92944== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==92944== ==92944== ==92944== ==92944== HEAP SUMMARY: ==92944== in use at exit: 700,829 bytes in 9,379 blocks ==92944== total heap usage: 864,333 allocs, 854,954 frees, 1,475,993,505 bytes allocated ==92944== ==92944== LEAK SUMMARY: ==92944== definitely lost: 0 bytes in 0 blocks ==92944== indirectly lost: 0 bytes in 0 blocks ==92944== possibly lost: 0 bytes in 0 blocks ==92944== still reachable: 120 bytes in 4 blocks ==92944== suppressed: 700,709 bytes in 9,375 blocks ==92944== Reachable blocks (those to which a pointer was found) are not shown. ==92944== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==92944== ==92944== For lists of detected and suppressed errors, rerun with: -s ==92944== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)