==79572== Memcheck, a memory error detector ==79572== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==79572== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==79572== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==79572== Parent PID: 77187 ==79572== ==79572== ==79572== FILE DESCRIPTORS: 9 open (3 std) at exit. ==79572== Open file descriptor 12: ==79572== at 0xFD7922D: pipe (pipe.c:29) ==79572== by 0x1976807D: ??? ==79572== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79572== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79572== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79572== by 0x102C8D38: PetscInitialize (pinit.c:924) ==79572== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79572== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79572== by 0x225564: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79572== by 0x21EBE7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79572== by 0x222752: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79572== by 0x2225F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79572== by 0x222C89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79572== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==79572== ==79572== Open file descriptor 8: /dev/shm/open_mpi.0000 ==79572== at 0xFD7DBCC: __open_nocancel (open64_nocancel.c:39) ==79572== by 0xFD01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==79572== by 0xF58B822: ??? ==79572== by 0xF58B96F: ??? ==79572== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79572== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79572== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79572== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79572== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79572== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79572== by 0x102C8D38: PetscInitialize (pinit.c:924) ==79572== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79572== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79572== by 0x225564: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79572== by 0x21EBE7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79572== by 0x222752: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79572== by 0x2225F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79572== by 0x222C89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79572== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==79572== ==79572== Open file descriptor 112: ==79572== ==79572== ==79572== Open file descriptor 109: ==79572== ==79572== ==79572== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==79572== ==79572== ==79572== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==79572== ==79572== ==79572== ==79572== HEAP SUMMARY: ==79572== in use at exit: 700,684 bytes in 9,374 blocks ==79572== total heap usage: 7,488,937 allocs, 7,479,563 frees, 2,658,291,127 bytes allocated ==79572== ==79572== LEAK SUMMARY: ==79572== definitely lost: 0 bytes in 0 blocks ==79572== indirectly lost: 0 bytes in 0 blocks ==79572== possibly lost: 0 bytes in 0 blocks ==79572== still reachable: 56 bytes in 3 blocks ==79572== suppressed: 700,628 bytes in 9,371 blocks ==79572== Reachable blocks (those to which a pointer was found) are not shown. ==79572== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==79572== ==79572== For lists of detected and suppressed errors, rerun with: -s ==79572== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)