==79734== Memcheck, a memory error detector ==79734== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==79734== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==79734== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==79734== Parent PID: 77187 ==79734== ==79734== ==79734== FILE DESCRIPTORS: 9 open (3 std) at exit. ==79734== Open file descriptor 12: ==79734== at 0x10E9122D: pipe (pipe.c:29) ==79734== by 0x1976707D: ??? ==79734== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79734== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79734== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79734== by 0xF344D38: PetscInitialize (pinit.c:924) ==79734== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79734== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79734== by 0x1FFF43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==79734== by 0x1F9B11: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79734== by 0x1FD47C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79734== by 0x1FD31C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79734== by 0x1FD9B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79734== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==79734== ==79734== Open file descriptor 8: /dev/shm/open_mpi.0000 ==79734== at 0x10E95BCC: __open_nocancel (open64_nocancel.c:39) ==79734== by 0x10E19C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==79734== by 0xF1EE822: ??? ==79734== by 0xF1EE96F: ??? ==79734== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79734== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79734== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79734== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79734== by 0x106B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79734== by 0x1064DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79734== by 0xF344D38: PetscInitialize (pinit.c:924) ==79734== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79734== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79734== by 0x1FFF43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==79734== by 0x1F9B11: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79734== by 0x1FD47C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79734== by 0x1FD31C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79734== by 0x1FD9B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79734== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==79734== ==79734== Open file descriptor 112: ==79734== ==79734== ==79734== Open file descriptor 109: ==79734== ==79734== ==79734== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==79734== ==79734== ==79734== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==79734== ==79734== ==79734== ==79734== HEAP SUMMARY: ==79734== in use at exit: 700,684 bytes in 9,374 blocks ==79734== total heap usage: 9,749,878 allocs, 9,740,504 frees, 2,617,650,990 bytes allocated ==79734== ==79734== LEAK SUMMARY: ==79734== definitely lost: 0 bytes in 0 blocks ==79734== indirectly lost: 0 bytes in 0 blocks ==79734== possibly lost: 0 bytes in 0 blocks ==79734== still reachable: 56 bytes in 3 blocks ==79734== suppressed: 700,628 bytes in 9,371 blocks ==79734== Reachable blocks (those to which a pointer was found) are not shown. ==79734== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==79734== ==79734== For lists of detected and suppressed errors, rerun with: -s ==79734== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)