==79350== Memcheck, a memory error detector ==79350== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==79350== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==79350== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==79350== Parent PID: 77187 ==79350== ==79350== ==79350== FILE DESCRIPTORS: 9 open (3 std) at exit. ==79350== Open file descriptor 12: ==79350== at 0xF9DC22D: pipe (pipe.c:29) ==79350== by 0x1976707D: ??? ==79350== by 0x14D704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79350== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79350== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79350== by 0x102C8D38: PetscInitialize (pinit.c:924) ==79350== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79350== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79350== by 0x311546: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79350== by 0x307B51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79350== by 0x30BF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79350== by 0x30BDF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79350== by 0x30C48F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79350== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==79350== ==79350== Open file descriptor 8: /dev/shm/open_mpi.0000 ==79350== at 0xF9E0BCC: __open_nocancel (open64_nocancel.c:39) ==79350== by 0xF964C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==79350== by 0xF1EE822: ??? ==79350== by 0xF1EE96F: ??? ==79350== by 0x14E156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79350== by 0x14E15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79350== by 0x14DCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==79350== by 0x14D702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==79350== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79350== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==79350== by 0x102C8D38: PetscInitialize (pinit.c:924) ==79350== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==79350== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==79350== by 0x311546: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==79350== by 0x307B51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==79350== by 0x30BF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==79350== by 0x30BDF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==79350== by 0x30C48F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==79350== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==79350== ==79350== Open file descriptor 112: ==79350== ==79350== ==79350== Open file descriptor 109: ==79350== ==79350== ==79350== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==79350== ==79350== ==79350== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==79350== ==79350== ==79350== ==79350== HEAP SUMMARY: ==79350== in use at exit: 700,684 bytes in 9,374 blocks ==79350== total heap usage: 12,851,780 allocs, 12,842,406 frees, 3,876,798,931 bytes allocated ==79350== ==79350== LEAK SUMMARY: ==79350== definitely lost: 0 bytes in 0 blocks ==79350== indirectly lost: 0 bytes in 0 blocks ==79350== possibly lost: 0 bytes in 0 blocks ==79350== still reachable: 56 bytes in 3 blocks ==79350== suppressed: 700,628 bytes in 9,371 blocks ==79350== Reachable blocks (those to which a pointer was found) are not shown. ==79350== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==79350== ==79350== For lists of detected and suppressed errors, rerun with: -s ==79350== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 32 from 32)