==84330== Memcheck, a memory error detector ==84330== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==84330== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==84330== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==84330== Parent PID: 77187 ==84330== ==84330== ==84330== FILE DESCRIPTORS: 9 open (3 std) at exit. ==84330== Open file descriptor 12: ==84330== at 0xFD3722D: pipe (pipe.c:29) ==84330== by 0x1976807D: ??? ==84330== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==84330== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==84330== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==84330== by 0x102C8D38: PetscInitialize (pinit.c:924) ==84330== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==84330== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==84330== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==84330== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==84330== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==84330== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==84330== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==84330== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==84330== ==84330== Open file descriptor 8: /dev/shm/open_mpi.0000 ==84330== at 0xFD3BBCC: __open_nocancel (open64_nocancel.c:39) ==84330== by 0xFCBFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==84330== by 0xF58B822: ??? ==84330== by 0xF58B96F: ??? ==84330== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==84330== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==84330== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==84330== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==84330== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==84330== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==84330== by 0x102C8D38: PetscInitialize (pinit.c:924) ==84330== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==84330== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==84330== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==84330== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==84330== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==84330== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==84330== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==84330== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==84330== ==84330== Open file descriptor 112: ==84330== ==84330== ==84330== Open file descriptor 109: ==84330== ==84330== ==84330== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==84330== ==84330== ==84330== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==84330== ==84330== ==84330== ==84330== HEAP SUMMARY: ==84330== in use at exit: 700,749 bytes in 9,378 blocks ==84330== total heap usage: 2,359,108 allocs, 2,349,730 frees, 1,791,569,540 bytes allocated ==84330== ==84330== LEAK SUMMARY: ==84330== definitely lost: 0 bytes in 0 blocks ==84330== indirectly lost: 0 bytes in 0 blocks ==84330== possibly lost: 0 bytes in 0 blocks ==84330== still reachable: 56 bytes in 3 blocks ==84330== suppressed: 700,693 bytes in 9,375 blocks ==84330== Reachable blocks (those to which a pointer was found) are not shown. ==84330== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==84330== ==84330== For lists of detected and suppressed errors, rerun with: -s ==84330== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)