==87371== Memcheck, a memory error detector ==87371== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==87371== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==87371== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==87371== Parent PID: 77187 ==87371== ==87371== ==87371== FILE DESCRIPTORS: 9 open (3 std) at exit. ==87371== Open file descriptor 12: ==87371== at 0xF9DC22D: pipe (pipe.c:29) ==87371== by 0x1976707D: ??? ==87371== by 0x14D704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==87371== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==87371== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==87371== by 0x102C8D38: PetscInitialize (pinit.c:924) ==87371== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==87371== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==87371== by 0x1D6688: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==87371== by 0x1CE1D1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==87371== by 0x1D1A50: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==87371== by 0x1D18F0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==87371== by 0x1D1F87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==87371== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==87371== ==87371== Open file descriptor 8: /dev/shm/open_mpi.0000 ==87371== at 0xF9E0BCC: __open_nocancel (open64_nocancel.c:39) ==87371== by 0xF964C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==87371== by 0xF1EE822: ??? ==87371== by 0xF1EE96F: ??? ==87371== by 0x14E156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==87371== by 0x14E15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==87371== by 0x14DCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==87371== by 0x14D702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==87371== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==87371== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==87371== by 0x102C8D38: PetscInitialize (pinit.c:924) ==87371== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==87371== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==87371== by 0x1D6688: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==87371== by 0x1CE1D1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==87371== by 0x1D1A50: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==87371== by 0x1D18F0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==87371== by 0x1D1F87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==87371== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==87371== ==87371== Open file descriptor 112: ==87371== ==87371== ==87371== Open file descriptor 109: ==87371== ==87371== ==87371== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==87371== ==87371== ==87371== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==87371== ==87371== ==87371== ==87371== HEAP SUMMARY: ==87371== in use at exit: 700,700 bytes in 9,375 blocks ==87371== total heap usage: 11,684,475 allocs, 11,675,100 frees, 2,223,681,720 bytes allocated ==87371== ==87371== LEAK SUMMARY: ==87371== definitely lost: 0 bytes in 0 blocks ==87371== indirectly lost: 0 bytes in 0 blocks ==87371== possibly lost: 0 bytes in 0 blocks ==87371== still reachable: 72 bytes in 4 blocks ==87371== suppressed: 700,628 bytes in 9,371 blocks ==87371== Reachable blocks (those to which a pointer was found) are not shown. ==87371== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==87371== ==87371== For lists of detected and suppressed errors, rerun with: -s ==87371== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)