==93399== Memcheck, a memory error detector ==93399== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==93399== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==93399== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==93399== Parent PID: 77187 ==93399== ==93399== ==93399== FILE DESCRIPTORS: 9 open (3 std) at exit. ==93399== Open file descriptor 12: ==93399== at 0x1262822D: pipe (pipe.c:29) ==93399== by 0x1B42907D: ??? ==93399== by 0x1658B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93399== by 0x11F32418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93399== by 0x11ECBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93399== by 0x10BA2D38: PetscInitialize (pinit.c:924) ==93399== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93399== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93399== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==93399== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93399== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93399== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93399== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93399== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==93399== ==93399== Open file descriptor 8: /dev/shm/open_mpi.0000 ==93399== at 0x1262CBCC: __open_nocancel (open64_nocancel.c:39) ==93399== by 0x125B0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==93399== by 0x11E2C822: ??? ==93399== by 0x11E2C96F: ??? ==93399== by 0x166326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93399== by 0x16632938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93399== by 0x165E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93399== by 0x1658B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93399== by 0x11F32418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93399== by 0x11ECBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93399== by 0x10BA2D38: PetscInitialize (pinit.c:924) ==93399== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93399== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93399== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==93399== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93399== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93399== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93399== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93399== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==93399== ==93399== Open file descriptor 112: ==93399== ==93399== ==93399== Open file descriptor 109: ==93399== ==93399== ==93399== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==93399== ==93399== ==93399== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==93399== ==93399== ==93399== ==93399== HEAP SUMMARY: ==93399== in use at exit: 700,700 bytes in 9,374 blocks ==93399== total heap usage: 16,188,550 allocs, 16,179,176 frees, 2,845,047,101 bytes allocated ==93399== ==93399== LEAK SUMMARY: ==93399== definitely lost: 0 bytes in 0 blocks ==93399== indirectly lost: 0 bytes in 0 blocks ==93399== possibly lost: 0 bytes in 0 blocks ==93399== still reachable: 56 bytes in 3 blocks ==93399== suppressed: 700,644 bytes in 9,371 blocks ==93399== Reachable blocks (those to which a pointer was found) are not shown. ==93399== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==93399== ==93399== For lists of detected and suppressed errors, rerun with: -s ==93399== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)