==92767== Memcheck, a memory error detector ==92767== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==92767== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==92767== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==92767== Parent PID: 77187 ==92767== ==92767== ==92767== FILE DESCRIPTORS: 9 open (3 std) at exit. ==92767== Open file descriptor 12: ==92767== at 0x10D6822D: pipe (pipe.c:29) ==92767== by 0x1976707D: ??? ==92767== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92767== by 0x10672418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92767== by 0x1060BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92767== by 0xF2E2D38: PetscInitialize (pinit.c:924) ==92767== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92767== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92767== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92767== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92767== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92767== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92767== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92767== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==92767== ==92767== Open file descriptor 8: /dev/shm/open_mpi.0000 ==92767== at 0x10D6CBCC: __open_nocancel (open64_nocancel.c:39) ==92767== by 0x10CF0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==92767== by 0x1056C822: ??? ==92767== by 0x1056C96F: ??? ==92767== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92767== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92767== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92767== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92767== by 0x10672418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92767== by 0x1060BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92767== by 0xF2E2D38: PetscInitialize (pinit.c:924) ==92767== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92767== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92767== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92767== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92767== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92767== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92767== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92767== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==92767== ==92767== Open file descriptor 112: ==92767== ==92767== ==92767== Open file descriptor 109: ==92767== ==92767== ==92767== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==92767== ==92767== ==92767== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==92767== ==92767== ==92767== ==92767== HEAP SUMMARY: ==92767== in use at exit: 700,684 bytes in 9,374 blocks ==92767== total heap usage: 657,493 allocs, 648,119 frees, 1,527,853,464 bytes allocated ==92767== ==92767== LEAK SUMMARY: ==92767== definitely lost: 0 bytes in 0 blocks ==92767== indirectly lost: 0 bytes in 0 blocks ==92767== possibly lost: 0 bytes in 0 blocks ==92767== still reachable: 56 bytes in 3 blocks ==92767== suppressed: 700,628 bytes in 9,371 blocks ==92767== Reachable blocks (those to which a pointer was found) are not shown. ==92767== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==92767== ==92767== For lists of detected and suppressed errors, rerun with: -s ==92767== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)