==92845== Memcheck, a memory error detector ==92845== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==92845== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==92845== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==92845== Parent PID: 77187 ==92845== ==92845== ==92845== FILE DESCRIPTORS: 9 open (3 std) at exit. ==92845== Open file descriptor 12: ==92845== at 0xDC7422D: pipe (pipe.c:29) ==92845== by 0x1976707D: ??? ==92845== by 0x14D6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92845== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92845== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92845== by 0x101E1D38: PetscInitialize (pinit.c:924) ==92845== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92845== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92845== by 0x123754: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==92845== by 0x11EC6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92845== by 0x12128E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92845== by 0x12112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92845== by 0x1217C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92845== by 0x11D095: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==92845== ==92845== Open file descriptor 8: /dev/shm/open_mpi.0000 ==92845== at 0xDC78BCC: __open_nocancel (open64_nocancel.c:39) ==92845== by 0xDBFCC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==92845== by 0xD5AF822: ??? ==92845== by 0xD5AF96F: ??? ==92845== by 0x14E136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92845== by 0x14E13938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92845== by 0x14DC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92845== by 0x14D6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92845== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92845== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92845== by 0x101E1D38: PetscInitialize (pinit.c:924) ==92845== by 0xD57A23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92845== by 0xD57A28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92845== by 0x123754: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==92845== by 0x11EC6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92845== by 0x12128E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92845== by 0x12112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92845== by 0x1217C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92845== by 0x11D095: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==92845== ==92845== Open file descriptor 112: ==92845== ==92845== ==92845== Open file descriptor 109: ==92845== ==92845== ==92845== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==92845== ==92845== ==92845== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==92845== ==92845== ==92845== ==92845== HEAP SUMMARY: ==92845== in use at exit: 700,684 bytes in 9,374 blocks ==92845== total heap usage: 40,689,207 allocs, 40,679,833 frees, 3,845,600,089 bytes allocated ==92845== ==92845== LEAK SUMMARY: ==92845== definitely lost: 0 bytes in 0 blocks ==92845== indirectly lost: 0 bytes in 0 blocks ==92845== possibly lost: 0 bytes in 0 blocks ==92845== still reachable: 56 bytes in 3 blocks ==92845== suppressed: 700,628 bytes in 9,371 blocks ==92845== Reachable blocks (those to which a pointer was found) are not shown. ==92845== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==92845== ==92845== For lists of detected and suppressed errors, rerun with: -s ==92845== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)