==93471== Memcheck, a memory error detector ==93471== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==93471== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==93471== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==93471== Parent PID: 77187 ==93471== ==93471== ==93471== FILE DESCRIPTORS: 9 open (3 std) at exit. ==93471== Open file descriptor 12: ==93471== at 0x1262822D: pipe (pipe.c:29) ==93471== by 0x1B42907D: ??? ==93471== by 0x1658B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93471== by 0x11F32418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93471== by 0x11ECBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93471== by 0x10BA2D38: PetscInitialize (pinit.c:924) ==93471== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93471== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93471== by 0x11FDC3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==93471== by 0x11B633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93471== by 0x11D8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93471== by 0x11D7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93471== by 0x11DDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93471== by 0x119E35: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==93471== ==93471== Open file descriptor 8: /dev/shm/open_mpi.0000 ==93471== at 0x1262CBCC: __open_nocancel (open64_nocancel.c:39) ==93471== by 0x125B0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==93471== by 0x11E2C822: ??? ==93471== by 0x11E2C96F: ??? ==93471== by 0x166326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93471== by 0x16632938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93471== by 0x165E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==93471== by 0x1658B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==93471== by 0x11F32418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93471== by 0x11ECBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==93471== by 0x10BA2D38: PetscInitialize (pinit.c:924) ==93471== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==93471== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==93471== by 0x11FDC3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==93471== by 0x11B633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==93471== by 0x11D8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==93471== by 0x11D7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==93471== by 0x11DDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==93471== by 0x119E35: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==93471== ==93471== Open file descriptor 112: ==93471== ==93471== ==93471== Open file descriptor 109: ==93471== ==93471== ==93471== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==93471== ==93471== ==93471== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==93471== ==93471== ==93471== ==93471== HEAP SUMMARY: ==93471== in use at exit: 700,845 bytes in 9,379 blocks ==93471== total heap usage: 1,621,126 allocs, 1,611,747 frees, 1,473,874,883 bytes allocated ==93471== ==93471== LEAK SUMMARY: ==93471== definitely lost: 0 bytes in 0 blocks ==93471== indirectly lost: 0 bytes in 0 blocks ==93471== possibly lost: 0 bytes in 0 blocks ==93471== still reachable: 136 bytes in 4 blocks ==93471== suppressed: 700,709 bytes in 9,375 blocks ==93471== Reachable blocks (those to which a pointer was found) are not shown. ==93471== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==93471== ==93471== For lists of detected and suppressed errors, rerun with: -s ==93471== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)