==92869== Memcheck, a memory error detector ==92869== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==92869== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==92869== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==92869== Parent PID: 77187 ==92869== ==92869== ==92869== FILE DESCRIPTORS: 9 open (3 std) at exit. ==92869== Open file descriptor 12: ==92869== at 0x10E4F22D: pipe (pipe.c:29) ==92869== by 0x1976707D: ??? ==92869== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92869== by 0x10672418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92869== by 0x1060BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92869== by 0xF2E2D38: PetscInitialize (pinit.c:924) ==92869== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92869== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92869== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92869== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92869== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92869== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92869== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92869== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==92869== ==92869== Open file descriptor 8: /dev/shm/open_mpi.0000 ==92869== at 0x10E53BCC: __open_nocancel (open64_nocancel.c:39) ==92869== by 0x10DD7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==92869== by 0x1056C822: ??? ==92869== by 0x1056C96F: ??? ==92869== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92869== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92869== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==92869== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==92869== by 0x10672418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92869== by 0x1060BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==92869== by 0xF2E2D38: PetscInitialize (pinit.c:924) ==92869== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==92869== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==92869== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==92869== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==92869== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==92869== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==92869== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==92869== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==92869== ==92869== Open file descriptor 112: ==92869== ==92869== ==92869== Open file descriptor 109: ==92869== ==92869== ==92869== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==92869== ==92869== ==92869== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==92869== ==92869== ==92869== ==92869== HEAP SUMMARY: ==92869== in use at exit: 700,749 bytes in 9,378 blocks ==92869== total heap usage: 1,401,697 allocs, 1,392,319 frees, 1,413,628,980 bytes allocated ==92869== ==92869== LEAK SUMMARY: ==92869== definitely lost: 0 bytes in 0 blocks ==92869== indirectly lost: 0 bytes in 0 blocks ==92869== possibly lost: 0 bytes in 0 blocks ==92869== still reachable: 56 bytes in 3 blocks ==92869== suppressed: 700,693 bytes in 9,375 blocks ==92869== Reachable blocks (those to which a pointer was found) are not shown. ==92869== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==92869== ==92869== For lists of detected and suppressed errors, rerun with: -s ==92869== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)