==191456== Memcheck, a memory error detector ==191456== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==191456== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==191456== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==191456== Parent PID: 175495 ==191456== ==191456== ==191456== FILE DESCRIPTORS: 9 open (3 std) at exit. ==191456== Open file descriptor 12: ==191456== at 0x1129C22D: pipe (pipe.c:29) ==191456== by 0x1B42B07D: ??? ==191456== by 0x1662B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==191456== by 0x12EF8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191456== by 0x12E91D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191456== by 0x11B88D38: PetscInitialize (pinit.c:924) ==191456== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==191456== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==191456== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==191456== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==191456== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==191456== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==191456== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==191456== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==191456== ==191456== Open file descriptor 8: /dev/shm/open_mpi.0000 ==191456== at 0x112A0BCC: __open_nocancel (open64_nocancel.c:39) ==191456== by 0x11224C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==191456== by 0x10AAE822: ??? ==191456== by 0x10AAE96F: ??? ==191456== by 0x166D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191456== by 0x166D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191456== by 0x16686922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191456== by 0x1662B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==191456== by 0x12EF8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191456== by 0x12E91D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191456== by 0x11B88D38: PetscInitialize (pinit.c:924) ==191456== by 0x10A7923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==191456== by 0x10A7928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==191456== by 0x23B3BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==191456== by 0x2318B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==191456== by 0x235FE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==191456== by 0x235E82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==191456== by 0x236519: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==191456== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==191456== ==191456== Open file descriptor 116: ==191456== ==191456== ==191456== Open file descriptor 112: ==191456== ==191456== ==191456== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==191456== ==191456== ==191456== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==191456== ==191456== ==191456== ==191456== HEAP SUMMARY: ==191456== in use at exit: 700,702 bytes in 9,374 blocks ==191456== total heap usage: 6,313,734 allocs, 6,304,360 frees, 2,073,035,106 bytes allocated ==191456== ==191456== LEAK SUMMARY: ==191456== definitely lost: 0 bytes in 0 blocks ==191456== indirectly lost: 0 bytes in 0 blocks ==191456== possibly lost: 0 bytes in 0 blocks ==191456== still reachable: 56 bytes in 3 blocks ==191456== suppressed: 700,646 bytes in 9,371 blocks ==191456== Reachable blocks (those to which a pointer was found) are not shown. ==191456== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==191456== ==191456== For lists of detected and suppressed errors, rerun with: -s ==191456== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)