==193708== Memcheck, a memory error detector ==193708== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==193708== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==193708== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==193708== Parent PID: 175495 ==193708== ==193708== Warning: invalid file descriptor -1 in syscall close() ==193708== ==193708== FILE DESCRIPTORS: 9 open (3 std) at exit. ==193708== Open file descriptor 12: ==193708== at 0xC0E222D: pipe (pipe.c:29) ==193708== by 0x1430B07D: ??? ==193708== by 0xFFCC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==193708== by 0xB9D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==193708== by 0xB96BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==193708== by 0xA2ADD38: PetscInitialize (pinit.c:924) ==193708== by 0xA12023F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==193708== by 0xA12028D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==193708== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==193708== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==193708== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==193708== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==193708== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==193708== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==193708== ==193708== Open file descriptor 8: /dev/shm/open_mpi.0000 ==193708== at 0xC0E6BCC: __open_nocancel (open64_nocancel.c:39) ==193708== by 0xC06AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==193708== by 0xA155822: ??? ==193708== by 0xA15596F: ??? ==193708== by 0x100716DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==193708== by 0x10071938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==193708== by 0x10027922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==193708== by 0xFFCC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==193708== by 0xB9D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==193708== by 0xB96BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==193708== by 0xA2ADD38: PetscInitialize (pinit.c:924) ==193708== by 0xA12023F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==193708== by 0xA12028D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==193708== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==193708== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==193708== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==193708== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==193708== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==193708== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==193708== ==193708== Open file descriptor 116: ==193708== ==193708== ==193708== Open file descriptor 112: ==193708== ==193708== ==193708== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==193708== ==193708== ==193708== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==193708== ==193708== ==193708== ==193708== HEAP SUMMARY: ==193708== in use at exit: 701,150 bytes in 9,383 blocks ==193708== total heap usage: 6,620,297 allocs, 6,610,914 frees, 4,033,849,736 bytes allocated ==193708== ==193708== LEAK SUMMARY: ==193708== definitely lost: 0 bytes in 0 blocks ==193708== indirectly lost: 0 bytes in 0 blocks ==193708== possibly lost: 0 bytes in 0 blocks ==193708== still reachable: 24 bytes in 2 blocks ==193708== suppressed: 701,126 bytes in 9,381 blocks ==193708== Reachable blocks (those to which a pointer was found) are not shown. ==193708== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==193708== ==193708== For lists of detected and suppressed errors, rerun with: -s ==193708== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)